RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MGAT2Q10469 447 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 NFATC4Q14934 902 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 KIR2DS3Q14952 304 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 SNAI3Q3KNW1 292 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 PIP5KL1Q5T9C9 394 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 TXNDC8Q6A555 127 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 ANKRD16Q6P6B7 361 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 TCF24Q7RTU0 167 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 LRRC25Q8N386 305 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-201ENST00000316433 LRRC75AQ8NAA5 344 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 LINC01555Q8NAE3 123 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 OR51A2Q8NGJ7 313 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 SNIP1Q8TAD8 396 aaKnown RBP5.88□□□□□ -1.47
ZNF540-201ENST00000316433 SCAMP4Q969E2 229 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 MS4A10Q96PG2 267 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 RARRES2Q99969 163 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 CST11Q9H112 138 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 ELL3Q9HB65 397 aaPredicted RBP5.88□□□□□ -1.47
ZNF540-201ENST00000316433 NOX4Q9NPH5 578 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 CLDND1Q9NY35 253 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 VSIG4Q9Y279 399 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 LRP12Q9Y561 859 aa5.88□□□□□ -1.47
ZNF540-201ENST00000316433 C1QTNF3-AMACRE9PGA6 284 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 M0QYG6 137 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TRAPPC6AO75865 159 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 HMGN2P05204 90 aaKnown RBP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 PSG1P11464 419 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 IL9P15248 144 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 PRSS3P35030 304 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 IL24Q13007 206 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 PDGFRLQ15198 375 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 VAMP3Q15836 100 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF66Q6ZN08 573 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 LYPD6Q86Y78 171 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 NUP43Q8NFH3 380 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 OR5AK3PQ8NH89 298 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF563Q8TA94 476 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 FAM222BQ8WU58 562 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM121BQ9BXQ6 578 aaPredicted RBP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM242Q9NWH2 141 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 THAP10Q9P2Z0 257 aaPredicted RBP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 CLN8Q9UBY8 286 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF814B7Z6K7 855 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TNFRSF10CO14798 259 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 WNT11O96014 354 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 C8AP07357 584 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 SCGB1A1P11684 91 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 EDNRAP25101 427 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 BCL6P41182 706 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF157P51786 506 aaPredicted RBP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 NCBP2P52298 156 aaKnown RBP eCLIP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 CRYBA4P53673 196 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 LTBQ06643 244 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 FOXF1Q12946 379 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 FNDC7Q5VTL7 733 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF550Q7Z398 422 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 DND1Q8IYX4 353 aaKnown RBP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM229BQ8NBD8 167 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 BHLHE23Q8NDY6 225 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 C11orf40Q8WZ69 217 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM186Q96B77 213 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 APH1AQ96BI3 265 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 SLC35A4Q96G79 324 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 OR6C1Q96RD1 312 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 SDF2Q99470 211 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 MCHR1Q99705 422 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 CABLES2Q9BTV7 478 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 CNIH4Q9P003 139 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 C14orf166Q9Y224 244 aaKnown RBP5.87□□□□□ -1.47
ZNF540-201ENST00000316433 TICRRQ7Z2Z1 1910 aa5.87□□□□□ -1.47
ZNF540-201ENST00000316433 RIIAD1A6NNX1 92 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 PIN1P1O15428 100 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 ZNF735P0CB33 412 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 ANOS1P23352 680 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 PSG3Q16557 428 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 FCRL6Q6DN72 434 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 OPN5Q6U736 354 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM25Q86YD3 366 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 CYB561A3Q8NBI2 242 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 OR13C9Q8NGT0 318 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 FAM174AQ8TBP5 190 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 TMEM170AQ8WVE7 144 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 CHODLQ9H9P2 273 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 WFDC1Q9HC57 220 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 SLC45A2Q9UMX9 530 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 FUT9Q9Y231 359 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 STRAPQ9Y3F4 350 aaKnown RBP5.86□□□□□ -1.47
ZNF540-201ENST00000316433 YPEL1O60688 119 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 KLF8O95600 359 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-201ENST00000316433 SRP19P09132 144 aaKnown RBP5.86□□□□□ -1.47
ZNF540-201ENST00000316433 PET100P0DJ07 73 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 CMPK1P30085 196 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 OTX1P32242 354 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-201ENST00000316433 PPP1CCP36873 323 aaKnown RBP5.86□□□□□ -1.47
ZNF540-201ENST00000316433 RAB38P57729 211 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 SIRPAP78324 504 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 ROM1Q03395 351 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 PLAURQ03405 335 aa5.86□□□□□ -1.47
ZNF540-201ENST00000316433 MLF2Q15773 248 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms