RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Zfp961E9Q4R5 444 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Cldn20G5E8X0 219 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Ly6aP05533 134 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 DctdQ8K2D6 178 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Ubac2Q8R1K1 345 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Tmem175Q9CXY1 499 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Supt7lQ9CZV5 412 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 CtsjQ9R014 334 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Zfp97E9PZP6 546 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Psg20E9Q9B4 475 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Zfp988F6VKC7 633 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Zfp960L7N267 546 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 AipO08915 330 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 AanatO88816 205 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 AgrpP56473 131 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Ppp1caP62137 330 aaKnown RBP12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Prss48Q14B25 312 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gpr160Q3U3F9 336 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr1299Q7TQX5 312 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr907Q7TRC7 310 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Pdlim5Q8CI51 591 aaKnown RBP12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Syngr3Q8R191 229 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr1110Q8VG38 312 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Tmprss11dQ8VHK8 417 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Cthrc1Q9D1D6 245 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Wwtr1Q9EPK5 395 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Slco1b2Q9JJL3 689 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr628K7N6B2 316 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Tcl1aP56280 116 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Rab3cP62823 227 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 ApoolQ78IK4 265 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr361Q8VF16 322 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr97Q8VFE1 310 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 CsprsQ99388 208 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Hoga1Q9DCU9 321 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm9047B9EJX3 177 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm9125P0DMR6 365 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 S1pr2P52592 352 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Kcng3P59053 433 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 EbpP70245 230 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Tppp2Q0P5Y3 170 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Nol4lQ6DIB4 494 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Fam98bQ80VD1 429 aaKnown RBP12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Mospd3Q8BGG6 235 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Fam221aQ8C790 301 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr168Q8VF05 312 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr156Q8VGA9 318 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr531Q8VGL2 304 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Samt4Q9D4X6 233 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Sun5Q9DA32 373 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Nat8Q9JIY7 227 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Lhx6Q9R1R0 363 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Tmem196V9GX04 182 aa12.5□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm21731A0A286YDE9 180 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Susd5G3UW60 619 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Vmn1r57K7N731 310 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Kcns1O35173 497 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Bpifa2P07743 235 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr804Q7TRH7 314 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Upk3bQ80YF6 275 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Aph1aQ8BVF7 265 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 C1sbQ8CFG8 688 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Vmn1r89Q8R256 316 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Tmem179bQ9CY24 219 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Pla2g12aQ9EPR2 192 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 RangrfQ9JIB0 185 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gk2Q9WU65 554 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 SvilQ8K4L3 2170 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm45716A0A1B0GRQ0 93 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr243E9PV96 316 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm609E9Q573 300 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm11009F7CWA7 138 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 CtdsplP58465 276 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Il9rQ01114 468 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr125Q14AJ9 320 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Znf488Q5HZG9 337 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 SrmQ64674 302 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Slc22a20Q80UJ1 556 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Glcci1Q8K3I9 537 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Vmn1r225Q8R2A5 298 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Lnx2Q91XL2 687 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Q9CWB7 115 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm15013V9GWY0 266 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Ighv1-24A0A0A6YY24 117 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Cbr2P08074 244 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Cd1d1P11609 336 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Cd1d2P11610 336 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 SryQ05738 395 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 NppcQ61839 126 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 CcnqQ8QZR8 250 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr1449Q8VEV8 314 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Olfr98Q8VFD9 309 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Mrpl24Q9CQ06 216 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gal3st1Q9JHE4 423 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Dock3Q8CIQ7 2027 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm13090A2A899 111 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Gm438B1ASB3 393 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Lancl1O89112 399 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 Il2rgP34902 369 aa12.49□□□□□ -0.41
Pcdha1-202ENSMUST00000193839 UevldQ3U1V6 471 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms