Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gm25239-201ENSMUST00000174915 86 ntBASIC32.98■■■□□ 2.87
Pdlim5Q8CI51 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pdlim5Q8CI51 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Pdlim5Q8CI51 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Pdlim5Q8CI51 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Pdlim5Q8CI51 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pdlim5Q8CI51 Psd-208ENSMUST00000224556 2034 ntBASIC29.59■■■□□ 2.33
Pdlim5Q8CI51 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pdlim5Q8CI51 Gm15042-201ENSMUST00000120212 883 ntBASIC29.41■■■□□ 2.3
Pdlim5Q8CI51 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pdlim5Q8CI51 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pdlim5Q8CI51 Gm15045-201ENSMUST00000117359 883 ntBASIC28.87■■■□□ 2.21
Pdlim5Q8CI51 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pdlim5Q8CI51 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Pdlim5Q8CI51 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.57■■■□□ 2.16
Pdlim5Q8CI51 Gm24109-201ENSMUST00000175489 103 ntBASIC28.32■■■□□ 2.12
Pdlim5Q8CI51 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pdlim5Q8CI51 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pdlim5Q8CI51 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pdlim5Q8CI51 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pdlim5Q8CI51 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pdlim5Q8CI51 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pdlim5Q8CI51 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pdlim5Q8CI51 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pdlim5Q8CI51 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pdlim5Q8CI51 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pdlim5Q8CI51 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.81■■■□□ 2.04
Pdlim5Q8CI51 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pdlim5Q8CI51 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pdlim5Q8CI51 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pdlim5Q8CI51 Gm23366-201ENSMUST00000175022 89 ntBASIC27.64■■■□□ 2.02
Pdlim5Q8CI51 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pdlim5Q8CI51 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pdlim5Q8CI51 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.55■■■□□ 2
Pdlim5Q8CI51 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.53■■■□□ 2
Pdlim5Q8CI51 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pdlim5Q8CI51 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pdlim5Q8CI51 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pdlim5Q8CI51 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pdlim5Q8CI51 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pdlim5Q8CI51 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pdlim5Q8CI51 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pdlim5Q8CI51 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.08■■□□□ 1.93
Pdlim5Q8CI51 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Pdlim5Q8CI51 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.01■■□□□ 1.91
Pdlim5Q8CI51 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.96■■□□□ 1.91
Pdlim5Q8CI51 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pdlim5Q8CI51 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.88■■□□□ 1.89
Pdlim5Q8CI51 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pdlim5Q8CI51 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pdlim5Q8CI51 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pdlim5Q8CI51 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pdlim5Q8CI51 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.63■■□□□ 1.85
Pdlim5Q8CI51 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.63■■□□□ 1.85
Pdlim5Q8CI51 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pdlim5Q8CI51 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pdlim5Q8CI51 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pdlim5Q8CI51 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pdlim5Q8CI51 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pdlim5Q8CI51 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdlim5Q8CI51 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pdlim5Q8CI51 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdlim5Q8CI51 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.27■■□□□ 1.8
Pdlim5Q8CI51 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pdlim5Q8CI51 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pdlim5Q8CI51 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Pdlim5Q8CI51 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Pdlim5Q8CI51 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pdlim5Q8CI51 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pdlim5Q8CI51 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Pdlim5Q8CI51 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.1■■□□□ 1.77
Pdlim5Q8CI51 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.1■■□□□ 1.77
Pdlim5Q8CI51 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pdlim5Q8CI51 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pdlim5Q8CI51 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pdlim5Q8CI51 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pdlim5Q8CI51 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.94■■□□□ 1.74
Pdlim5Q8CI51 Gm27325-201ENSMUST00000175467 74 ntBASIC25.91■■□□□ 1.74
Pdlim5Q8CI51 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pdlim5Q8CI51 Gm25238-201ENSMUST00000174914 89 ntBASIC25.85■■□□□ 1.73
Pdlim5Q8CI51 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pdlim5Q8CI51 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pdlim5Q8CI51 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pdlim5Q8CI51 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.78■■□□□ 1.72
Pdlim5Q8CI51 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
Pdlim5Q8CI51 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Pdlim5Q8CI51 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pdlim5Q8CI51 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pdlim5Q8CI51 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pdlim5Q8CI51 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.64■■□□□ 1.7
Pdlim5Q8CI51 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pdlim5Q8CI51 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Pdlim5Q8CI51 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pdlim5Q8CI51 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pdlim5Q8CI51 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Pdlim5Q8CI51 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pdlim5Q8CI51 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pdlim5Q8CI51 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pdlim5Q8CI51 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pdlim5Q8CI51 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms