RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SMIM10L1P0DMW3 83 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 LPAR6P43657 344 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 SULT1A1P50225 295 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
USB1-212ENST00000566082 HFEQ30201 348 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 ZNF260Q3ZCT1 412 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 OR2I1PQ8NGU4 316 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 CTHRC1Q96CG8 243 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 SMIM10Q96HG1 83 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 BCO1Q9HAY6 547 aa9.35□□□□□ -0.91
USB1-212ENST00000566082 MSGN1A6NI15 193 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 CDRT15L2A8MXV6 281 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 CYTIPO60759 359 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 CD8AP01732 235 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 FABP4P15090 132 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 RBP2P50120 134 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 RRADP55042 308 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 NAAAQ02083 359 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 LY6G6FQ5SQ64 297 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 MKXQ8IYA7 352 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 ELSPBP1Q96BH3 223 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 MALSU1Q96EH3 234 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 SDSLQ96GA7 329 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 ZNF845Q96IR2 970 aaPredicted RBP9.34□□□□□ -0.91
USB1-212ENST00000566082 ZNF107Q9UII5 783 aaPredicted RBP9.34□□□□□ -0.91
USB1-212ENST00000566082 ARHGEF17Q96PE2 2063 aaPredicted RBP9.34□□□□□ -0.91
USB1-212ENST00000566082 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 MFNGO00587 321 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 SCRG1O75711 98 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 OR2J2O76002 312 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 RNF4P78317 190 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 SRPXP78539 464 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 DRAM2Q6UX65 266 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 RBMS3Q6XE24 437 aaKnown RBP9.34□□□□□ -0.91
USB1-212ENST00000566082 DPPA2Q7Z7J5 298 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 THNSL2Q86YJ6 484 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 EIF4E3Q8N5X7 224 aaKnown RBP9.34□□□□□ -0.91
USB1-212ENST00000566082 UBAC2Q8NBM4 344 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 SLC26A10Q8NG04 563 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 OR8B12Q8NGG6 310 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 CABLES2Q9BTV7 478 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 EDEM2Q9BV94 578 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 LRRC61Q9BV99 259 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 YBX2Q9Y2T7 364 aaKnown RBP9.34□□□□□ -0.91
USB1-212ENST00000566082 FAM24AA6NFZ4 105 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 ZNF217O75362 1048 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 LYPD3O95274 346 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 IGHV3-9P01782 118 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 FREM3P0C091 2139 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 FOXL2P58012 376 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 ECH1Q13011 328 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 AADACL3Q5VUY0 350 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 ZNF610Q8N9Z0 462 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 OR1N1Q8NGS0 311 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 LIPHQ8WWY8 451 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 NINJ1Q92982 152 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 RAB39BQ96DA2 213 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 OR10C1Q96KK4 312 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 LMAN1LQ9HAT1 526 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 SLC39A9Q9NUM3 307 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 WSB1Q9Y6I7 421 aa9.34□□□□□ -0.91
USB1-212ENST00000566082 YIF1AO95070 293 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 SCGB1D1O95968 90 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 TTRP02766 147 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 CD79AP11912 226 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 IL11P20809 199 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 TLE1Q04724 770 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 ZNF684Q5T5D7 378 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 ZNF429Q86V71 674 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 BHLHE23Q8NDY6 225 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 OR6C1Q96RD1 312 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 RCC2Q9P258 522 aaKnown RBP9.33□□□□□ -0.92
USB1-212ENST00000566082 SDK2Q58EX2 2172 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 AHCTF1Q8WYP5 2266 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 LINC01565O15544 149 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 P04436 131 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 GABRG2P18507 467 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 MMP16P51512 607 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
USB1-212ENST00000566082 FZD5Q13467 585 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 C17orf78Q8N4C9 275 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 COMMD1Q8N668 190 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 ST3GAL6Q9Y274 331 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 ZNF727A8MUV8 499 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 H3BMH7 237 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 K7EQS6 105 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 EGR4Q05215 589 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 NKAIN1Q4KMZ8 207 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 DHRS11Q6UWP2 260 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 AAED1Q7RTV5 226 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 FBXL14Q8N1E6 418 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 OR2AE1Q8NHA4 323 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 PTPMT1Q8WUK0 201 aaPredicted RBP9.33□□□□□ -0.92
USB1-212ENST00000566082 PSMF1Q92530 271 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 VN1R1Q9GZP7 353 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 TANC1Q9C0D5 1861 aa9.33□□□□□ -0.92
USB1-212ENST00000566082 TRAPPC2LH3BP13 241 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms