RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 SSC5DA1L4H1 1573 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 CBY3A6NI87 242 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 ADAM20O43506 726 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 DUS4LO95620 317 aaKnown RBP11.32□□□□□ -0.6
SYNM-203ENST00000560674 GNG3P63215 75 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 FAM3AP98173 230 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 CD300LDQ6UXZ3 194 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 HES4Q9HCC6 221 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 RASL12Q9NYN1 266 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 SERTM1A2A2V5 107 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 GLULP15104 373 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 KISS1RQ969F8 398 aaPredicted RBP11.32□□□□□ -0.6
SYNM-203ENST00000560674 RAB40CQ96S21 281 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 LRRC61Q9BV99 259 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 ZNF391Q9UJN7 358 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 GON4LQ3T8J9 2241 aa11.32□□□□□ -0.6
SYNM-203ENST00000560674 SHISA8B8ZZ34 492 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 CLDN34H7C241 214 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 M0R1X1 148 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 MMP7P09237 267 aaPredicted RBP11.31□□□□□ -0.6
SYNM-203ENST00000560674 GALR1P47211 349 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 HMGA2P52926 109 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 FMODQ06828 376 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 Q7L0L9 218 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 OR10D4PQ8NGN7 298 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 DHRS3O75911 302 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 CXCL10P02778 98 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 MRGPREQ86SM8 312 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 ADAT1Q9BUB4 502 aaKnown RBP11.31□□□□□ -0.6
SYNM-203ENST00000560674 LINC01387J3KSC0 135 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 IGHA2P01877 340 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 PTGFRP43088 359 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 RAB32Q13637 225 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 PHYHIPLQ96FC7 376 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 MARVELD1Q9BSK0 173 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 MPC2O95563 127 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 PCMT1P22061 227 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 PAX5Q02548 391 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 SLC38A11Q08AI6 406 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 TMEM37Q8WXS4 190 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 ZPBPQ9BS86 351 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 ALG1L2C9J202 215 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 OR2J3O76001 311 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
SYNM-203ENST00000560674 ALKBH6Q3KRA9 238 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 DEGS2Q6QHC5 323 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 TSPAN32Q96QS1 320 aa11.31□□□□□ -0.6
SYNM-203ENST00000560674 TCAPO15273 167 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 TNFSF15O95150 251 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MRM1Q6IN84 353 aaKnown RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 PIK3IP1Q96FE7 263 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 RBM38Q9H0Z9 239 aaKnown RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 C3orf85A0A1B0GTC6 90 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 TOX3O15405 576 aaPredicted RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MMP24Q9Y5R2 645 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 CEACAM6P40199 344 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 SMAD4Q13485 552 aaKnown RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 STUMQ69YW2 141 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 WDR61Q9GZS3 305 aaKnown RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 PPIL1Q9Y3C6 166 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 RGS13O14921 159 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 LY86O95711 162 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MVDP53602 400 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 CCL7P80098 99 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 PDCD1Q15116 288 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 PRSS54Q6PEW0 395 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MYPOPQ86VE0 399 aaPredicted RBP11.3□□□□□ -0.6
SYNM-203ENST00000560674 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 TAAR3PQ9P1P4 343 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 LRRC3CA6NJW4 275 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 RER1O15258 196 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 PNPP00491 289 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 IGFBP7Q16270 282 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 Q1RN00 199 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 NAA60Q9H7X0 242 aa11.3□□□□□ -0.6
SYNM-203ENST00000560674 ABCA3Q99758 1704 aa11.29□□□□□ -0.6
SYNM-203ENST00000560674 ANKRD20A5PA0PJZ0 165 aa11.29□□□□□ -0.6
SYNM-203ENST00000560674 CDC14BO60729 498 aa11.29□□□□□ -0.6
SYNM-203ENST00000560674 NGFP01138 241 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms