RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 H3BP45 60 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 OR7C1O76099 320 aaPredicted RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 CST4P01036 141 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 GSTP1P09211 210 aaKnown RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 PATE4P0C8F1 98 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 FSTP19883 344 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 RNF4P78317 190 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 NHLH2Q02577 135 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 CLEC12BQ2HXU8 276 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 PHF19Q5T6S3 580 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 RTN4IP1Q8WWV3 396 aaPredicted RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 ZNF319Q9P2F9 582 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 RFNGQ9Y644 331 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 OR5H15A6NDH6 313 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 OR5AC1P0C628 307 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 DCAF7P61962 342 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 HSD11B2P80365 405 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 HABP2Q14520 560 aaPredicted RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 FNDC7Q5VTL7 733 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 Q7L0L9 218 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 EMG1Q92979 244 aaKnown RBP11.22□□□□□ -0.61
VPS52-218ENST00000482399 ADIPOR1Q96A54 375 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 PBDC1Q9BVG4 233 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 LANCL2Q9NS86 450 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 SLC7A11Q9UPY5 501 aa11.22□□□□□ -0.61
VPS52-218ENST00000482399 C5orf63A6NC05 138 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 IL2RAP01589 272 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 ZNF728P0DKX0 622 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 KLK2P20151 261 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 DRD1P21728 446 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
VPS52-218ENST00000482399 GSK3AP49840 483 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 UBE2KP61086 200 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 USF2Q15853 346 aaPredicted RBP11.21□□□□□ -0.61
VPS52-218ENST00000482399 FDX2Q6P4F2 183 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 DNM1P46Q6ZS02 220 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 OR1N1Q8NGS0 311 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 OR6S1Q8NH40 331 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 BSCL2Q96G97 398 aaPredicted RBP11.21□□□□□ -0.61
VPS52-218ENST00000482399 PIGQQ9BRB3 760 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 FAM206AQ9NX38 181 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 HS3ST3A1Q9Y663 406 aa11.21□□□□□ -0.61
VPS52-218ENST00000482399 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 NPIPA2E9PIF3 369 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 NPIPA3F8WFD2 350 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.62
VPS52-218ENST00000482399 RAMP1O60894 148 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 PTGER4P35408 488 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 NOVA1P51513 510 aaKnown RBP11.21□□□□□ -0.62
VPS52-218ENST00000482399 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.62
VPS52-218ENST00000482399 ADAMTS17Q8TE56 1095 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 SLC5A7Q9GZV3 580 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.62
VPS52-218ENST00000482399 EML5Q05BV3 1969 aa11.21□□□□□ -0.62
VPS52-218ENST00000482399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 IFNA17P01571 189 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 HPNP05981 417 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 HKR1P10072 659 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 CD38P28907 300 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 FAHD2BQ6P2I3 314 aaPredicted RBP11.2□□□□□ -0.62
VPS52-218ENST00000482399 OR10G3Q8NGC4 313 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 FAHD2AQ96GK7 314 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 MMACHCQ9Y4U1 282 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 DHRS7CA6NNS2 312 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 FGF16O43320 207 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 OR2J2O76002 312 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 IGHV3-9P01782 118 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 CD79AP11912 226 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 ZNF708P17019 499 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 ZNF16P17020 682 aaPredicted RBP11.2□□□□□ -0.62
VPS52-218ENST00000482399 TBPP20226 339 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 SULT1A1P50225 295 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 SUPT4H1P63272 117 aaKnown RBP11.2□□□□□ -0.62
VPS52-218ENST00000482399 TMEM123Q8N131 208 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 OR5T1Q8NG75 326 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 LIPHQ8WWY8 451 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 RTBDNQ9BSG5 229 aaPredicted RBP11.2□□□□□ -0.62
VPS52-218ENST00000482399 DEFB126Q9BYW3 111 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 NELFAQ9H3P2 528 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 CARHSP1Q9Y2V2 147 aaKnown RBP11.2□□□□□ -0.62
VPS52-218ENST00000482399 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 MT-ND4LP03901 98 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 RAB5AP20339 215 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 S100PP25815 95 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 CSNK1A1P48729 337 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 SLC22A25Q6T423 547 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 OR11L1Q8NGX0 322 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 FBRSQ9HAH7 460 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 CEP250Q9BV73 2442 aa11.2□□□□□ -0.62
VPS52-218ENST00000482399 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms