RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ZNF404Q494X3 552 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 TMEM155Q4W5P6 130 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 FAM76BQ5HYJ3 339 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 CLVS2Q5SYC1 327 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 TMEM244Q5VVB8 128 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 ASPHD2Q6ICH7 369 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 TMPRSS11AQ6ZMR5 421 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 ANGPTL5Q86XS5 388 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 FAM90A1Q86YD7 464 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 CALHM1Q8IU99 346 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 C1orf87Q8N0U7 546 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 FGFRL1Q8N441 504 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 LINC01356Q8N9X3 169 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 OR13C3Q8NGS6 347 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 OR52N1Q8NH53 320 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 RPS4Y2Q8TD47 263 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 ERGIC1Q969X5 290 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 ORAI1Q96D31 301 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 RAB39BQ96DA2 213 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 MRPL48Q96GC5 212 aaKnown RBP6.45□□□□□ -1.38
CPSF4-202ENST00000412686 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 HIST1H2AAQ96QV6 131 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 NKX3-1Q99801 234 aaPredicted RBP6.45□□□□□ -1.38
CPSF4-202ENST00000412686 CHST5Q9GZS9 411 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 PATZ1Q9HBE1 687 aaKnown RBP6.45□□□□□ -1.38
CPSF4-202ENST00000412686 CTSZQ9UBR2 303 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 RAB26Q9ULW5 256 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 HHLA2Q9UM44 414 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 PCDHB10Q9UN67 800 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 ABCA1O95477 2261 aa6.45□□□□□ -1.38
CPSF4-202ENST00000412686 PQLC2LA1A4F0 135 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OOEPA6NGQ2 149 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OR5B21A6NL26 309 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 TMEM212A6NML5 194 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 DHRS7CA6NNS2 312 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 B4DSR2 109 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 IFNL4K9M1U5 179 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 LGALS8O00214 317 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 MYL12BO14950 172 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OGG1O15527 345 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 PLPP2O43688 288 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 RRP9O43818 475 aaKnown RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 INMTO95050 263 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 MT-ND2P03891 347 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 MSMBP08118 114 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 WNT2P09544 360 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 CCDC159P0C7I6 412 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 SELLP14151 372 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 ZNF20P17024 532 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 AMY2BP19961 511 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 CRHBPP24387 322 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 HAAOP46952 286 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 HSPA13P48723 471 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 MZT1Q08AG7 82 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 DMKNQ6E0U4 476 aaPredicted RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 FAM166AQ6J272 317 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 RPL22L1Q6P5R6 122 aaKnown RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 MUC20Q8N307 709 aaPredicted RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 SPICQ8N5J4 248 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 NANOGP1Q8N7R0 232 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OR5T2Q8NGG2 359 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OR5A2Q8NGI9 324 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OR13C9Q8NGT0 318 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OR5AK2Q8NH90 309 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 TSEN15Q8WW01 171 aaKnown RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 AQP3Q92482 292 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 RFT1Q96AA3 541 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 PGLYRP3Q96LB9 341 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 SPACA5Q96QH8 159 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 OR5M11Q96RB7 305 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 ZNF184Q99676 751 aaPredicted RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 COMMD4Q9H0A8 199 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 RASSF4Q9H2L5 321 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 SMURF1Q9HCE7 757 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 ABCB9Q9NP78 766 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 MMP26Q9NRE1 261 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 CHCHD3Q9NX63 227 aaKnown RBP6.44□□□□□ -1.38
CPSF4-202ENST00000412686 BABAM2Q9NXR7 383 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 SCN3BQ9NY72 215 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 KCNS2Q9ULS6 477 aa6.44□□□□□ -1.38
CPSF4-202ENST00000412686 SRRM5B3KS81 715 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 F8VVB4 439 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 F8VWA3 439 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 J3QT63 122 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 TNFRSF13BO14836 293 aaPredicted RBP6.43□□□□□ -1.38
CPSF4-202ENST00000412686 ADAM20O43506 726 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 GATBO75879 557 aaKnown RBP6.43□□□□□ -1.38
CPSF4-202ENST00000412686 ATF1P18846 271 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 GLRA1P23415 457 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 AZGP1P25311 298 aaKnown RBP6.43□□□□□ -1.38
CPSF4-202ENST00000412686 MAP2K4P45985 399 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 POU3F4P49335 361 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 CEBPDP49716 269 aaPredicted RBP6.43□□□□□ -1.38
CPSF4-202ENST00000412686 DVL1P1P54792 670 aaPredicted RBP6.43□□□□□ -1.38
CPSF4-202ENST00000412686 WNT4P56705 351 aa6.43□□□□□ -1.38
CPSF4-202ENST00000412686 RPS11P62280 158 aaKnown RBP eCLIP6.43□□□□□ -1.38
CPSF4-202ENST00000412686 MRPL28Q13084 256 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms