RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NPBQ8NG41 125 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 OR5M1Q8NGP8 315 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PIGXQ8TBF5 258 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PGLYRP3Q96LB9 341 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 ZNF599Q96NL3 588 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 BIRC8Q96P09 236 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 OR2M4Q96R27 311 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SOSTQ9BQB4 213 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 EMC6Q9BV81 110 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 LINC00597Q9H2U6 94 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 GUCA1BQ9UMX6 200 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PSG8Q9UQ74 426 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SLC22A13Q9Y226 551 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 PRELID1Q9Y255 219 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 SIGLEC7Q9Y286 467 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 TP53TG5Q9Y2B4 290 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 TCF20Q9UGU0 1960 aaKnown RBP3.59□□□□□ -1.83
LSM5-205ENST00000409952 NFASCO94856 1347 aa3.59□□□□□ -1.83
LSM5-205ENST00000409952 NUP153P49790 1475 aaKnown RBP3.59□□□□□ -1.84
LSM5-205ENST00000409952 WDR62O43379 1518 aa3.59□□□□□ -1.84
LSM5-205ENST00000409952 A0A087WWV3 80 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 TINCRA0A1B0GVN0 87 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 A0A1W2PQL4 384 aaPredicted RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 CEACAM18A8MTB9 384 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 F5H5T6 163 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 PHYHO14832 338 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 RP2O75695 350 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 SLC22A5O76082 557 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 HSPB1P04792 205 aaKnown RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 ISG15P05161 165 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 MRPL3P09001 348 aaKnown RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 HSD11B1P28845 292 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 TSPOP30536 169 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 GRPRP30550 384 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 PSMD7P51665 324 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 RAP1GDS1P52306 607 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 DR1Q01658 176 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 LAMTOR4Q0VGL1 99 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 KIAA0040Q15053 153 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 MARC1Q5VT66 337 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 FBXW9Q5XUX1 488 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 METTL7BQ6UX53 244 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 GPD1LQ8N335 351 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 STOML3Q8TAV4 291 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 BLNKQ8WV28 456 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 RERGQ96A58 199 aaPredicted RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 CCDC42Q96M95 316 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 C1orf147Q96MC9 270 aaPredicted RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 STACQ99469 402 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 PITX2Q99697 317 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 DEFB126Q9BYW3 111 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 SPNS1Q9H2V7 528 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 HEBP1Q9NRV9 189 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 ZNF226Q9NYT6 803 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 TRAPPC4Q9Y296 219 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 PALLDQ8WX93 1383 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 C9orf84Q5VXU9 1444 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 DENND4AQ7Z401 1863 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 CFAP65Q6ZU64 1925 aaKnown RBP3.58□□□□□ -1.84
LSM5-205ENST00000409952 GON4LQ3T8J9 2241 aa3.58□□□□□ -1.84
LSM5-205ENST00000409952 IGKV1-8A0A0C4DH67 115 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 C21orf140B9A014 251 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 CXCR6O00574 342 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 AZIN1O14977 448 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 PSPHP1O15172 72 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 ZG16O60844 167 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 ENTPD6O75354 484 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 ZNF189O75820 626 aaPredicted RBP3.57□□□□□ -1.84
LSM5-205ENST00000409952 CTDNEP1O95476 244 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 MOSP00540 346 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 TRBV12-3P01733 135 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 CALB1P05937 261 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 TCN2P20062 427 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 GABRR1P24046 479 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 TALDO1P37837 337 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 CYB561P49447 251 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 PSMB2P49721 201 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 GDI2P50395 445 aaKnown RBP3.57□□□□□ -1.84
LSM5-205ENST00000409952 ERFP50548 548 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 AP2S1P53680 142 aaPredicted RBP3.57□□□□□ -1.84
LSM5-205ENST00000409952 CDKN2DP55273 166 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 GLO1Q04760 184 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 TSPAN31Q12999 210 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 AKIRIN2Q53H80 203 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 ATAD3CQ5T2N8 411 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 SYPL2Q5VXT5 272 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 TMEM236Q5W0B7 351 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 KDM4DQ6B0I6 523 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 LAMTOR1Q6IAA8 161 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 DNAJC24Q6P3W2 148 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 LRRN1Q6UXK5 716 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 MTERF4Q7Z6M4 381 aaKnown RBP3.57□□□□□ -1.84
LSM5-205ENST00000409952 CPNE9Q8IYJ1 553 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 TTC21AQ8NDW8 1320 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 OR10G6Q8NH81 332 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 RXFP4Q8TDU9 374 aa3.57□□□□□ -1.84
LSM5-205ENST00000409952 MARC2Q969Z3 335 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms