RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 C1QTNF5Q9BXJ0 243 aa11.24□□□□□ -0.61
SPTLC1-201ENST00000262554 DEFB127Q9H1M4 99 aa11.24□□□□□ -0.61
SPTLC1-201ENST00000262554 SLC7A11Q9UPY5 501 aa11.24□□□□□ -0.61
SPTLC1-201ENST00000262554 A0A096LPE4 126 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 A0A1W2PPZ6 126 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 M0R233 179 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 CA11O75493 328 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 HTR3BO95264 441 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 IFNA7P01567 189 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 AMY2BP19961 511 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 TAS2R31P59538 309 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 TAS2R46P59540 309 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 GMFBP60983 142 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 OR8B8Q15620 311 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 GRK1Q15835 563 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 C3AR1Q16581 482 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 HOGA1Q86XE5 327 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ST8SIA4Q92187 359 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 Q96M66 194 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ST6GALNAC5Q9BVH7 336 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 B3GNT2Q9NY97 397 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 NOP16Q9Y3C1 178 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ZNF816-ZNF321PA0A0X1KG74 233 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 HMSDA8MTL9 139 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 COX5BP10606 129 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 LIPCP11150 499 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 EDN3P14138 238 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 GABRR1P24046 479 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ZBTB25P24278 435 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 OR3A3P47888 321 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 OR3A2P47893 321 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ATP1B3P54709 279 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 SEC61A1P61619 476 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 C6orf183Q5T699 404 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 LPCAT3Q6P1A2 487 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ZNF407Q9C0G0 2248 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
SPTLC1-201ENST00000262554 ARHGAP21Q5T5U3 1957 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 IGKV1-27A0A075B6S5 117 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 C9orf170A2RU37 121 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 MCRIP1C9JLW8 97 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 SPRY1O43609 319 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 ANGPTL7O43827 346 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 MPC2O95563 127 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 PLATP00750 562 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 IL2RAP01589 272 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 HLA-HP01893 362 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 SERPINA5P05154 406 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 CXCL2P19875 107 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 ARR3P36575 388 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 FUT6P51993 359 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 SNU13P55769 128 aaKnown RBP11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 IL13RA1P78552 427 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 PPP1R1AQ13522 171 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 OPCMLQ14982 345 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 PLCXD3Q63HM9 321 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 MOB3CQ70IA8 216 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 VASH2Q86V25 355 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 CSNK2A3Q8NEV1 391 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 OR5M8Q8NGP6 311 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 PIGCQ92535 297 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 SCGB3A2Q96PL1 93 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 PHB2Q99623 299 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 ZNF552Q9H707 407 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 DNAJC13O75165 2243 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 FREM1Q5H8C1 2179 aa11.22□□□□□ -0.61
SPTLC1-201ENST00000262554 FXYD6-FXYD2A0A087WZ82 144 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 ANKRD34BA5PLL1 514 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 ERVH48-1M5A8F1 160 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 CD79AP11912 226 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 AKR1C4P17516 323 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 CCNOP22674 350 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 MITD1Q8WV92 249 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 WDYHV1Q96HA8 205 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 FXYD6Q9H0Q3 95 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 PCDHB16Q9NRJ7 776 aa11.21□□□□□ -0.61
SPTLC1-201ENST00000262554 C5orf49A4QMS7 147 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 ARPC5O15511 151 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 NKX2-8O15522 239 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 EFSO43281 561 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 NOS1APO75052 506 aaPredicted RBP11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 VAMP1P23763 118 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 TNFSF10P50591 281 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 FGL1Q08830 312 aa11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.62
SPTLC1-201ENST00000262554 CHRFAM7AQ494W8 412 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms