RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MGMTP16455 207 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 BMP5P22003 454 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 GUCA2AQ02747 115 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 PLA1AQ53H76 456 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 Q6ZTK2 550 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 CHST4Q8NCG5 386 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 C1QTNF6Q9BXI9 259 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 METTL9Q9H1A3 318 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 DPAGT1Q9H3H5 408 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 MRPL15Q9P015 296 aaKnown RBP15.61■□□□□ 0.09
VIM-201ENST00000224237 COPZ2Q9P299 210 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 Q9UFV3 132 aa15.61■□□□□ 0.09
VIM-201ENST00000224237 ANKRD30BLA7E2S9 258 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 A8MXE2 369 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 CCNKO75909 580 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 CECR9P0C854 216 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 UCP2P55851 309 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 PCGF3Q3KNV8 242 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 CEACAM21Q3KPI0 293 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 MRGPRGQ86SM5 289 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 GLCCI1Q86VQ1 547 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 CREB3L1Q96BA8 519 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 SEH1LQ96EE3 360 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 TM2D1Q9BX74 207 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 ZMAT3Q9HA38 289 aaKnown RBP15.6■□□□□ 0.09
VIM-201ENST00000224237 HRASLSQ9HDD0 168 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 MPC1Q9Y5U8 109 aa15.6■□□□□ 0.09
VIM-201ENST00000224237 A0A0A6YYD4 124 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 TMEM235A6NFC5 223 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 CSTBP04080 98 aaKnown RBP15.59■□□□□ 0.09
VIM-201ENST00000224237 MELTFP08582 738 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 ZNF35P13682 527 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 RSU1Q15404 277 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 SPATA46Q5T0L3 261 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 OLFML2AQ68BL7 652 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 ASCL4Q6XD76 172 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 FAM89BQ8N5H3 189 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 PXT1Q8NFP0 134 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 OR51T1Q8NGJ9 327 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 OR10K1Q8NGX5 313 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 S100PBPQ96BU1 408 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 UPRTQ96BW1 309 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 CMBLQ96DG6 245 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 MARVELD1Q9BSK0 173 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 SELENOIQ9C0D9 397 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 OR2J1Q9GZK6 312 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 PAIP2BQ9ULR5 123 aaKnown RBP15.59■□□□□ 0.09
VIM-201ENST00000224237 PQLC2LA1A4F0 135 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 WIPF3A6NGB9 483 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 HMX3A6NHT5 357 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 EEF1E1-BLOC1S5C9J1V9 151 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 SPRY1O43609 319 aaPredicted RBP15.59■□□□□ 0.09
VIM-201ENST00000224237 MT-ND4P03905 459 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 CPT2P23786 658 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 FAUP35544 74 aaKnown RBP15.59■□□□□ 0.09
VIM-201ENST00000224237 PDZK1IP1Q13113 114 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 LY6DQ14210 128 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 CDNFQ49AH0 187 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 C1QTNF12Q5T7M4 302 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 RSBN1Q5VWQ0 802 aaPredicted RBP15.59■□□□□ 0.09
VIM-201ENST00000224237 BHLHE23Q8NDY6 225 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 OR1J1Q8NGS3 322 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 HPSE2Q8WWQ2 592 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 RAB3CQ96E17 227 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 RNF170Q96K19 258 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 HIST1H2AAQ96QV6 131 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 IL36GQ9NZH8 169 aa15.59■□□□□ 0.09
VIM-201ENST00000224237 IGHV1-18A0A0C4DH31 117 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 ANGPTL7O43827 346 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 PLATP00750 562 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 GSTP1P09211 210 aaKnown RBP15.58■□□□□ 0.08
VIM-201ENST00000224237 RAC2P15153 192 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 GNB3P16520 340 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 TUBG1P23258 451 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 RAD52P43351 418 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 OR2T2Q6IF00 324 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 ZSCAN4Q8NAM6 433 aaPredicted RBP15.58■□□□□ 0.08
VIM-201ENST00000224237 OR5A2Q8NGI9 324 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 OR6F1Q8NGZ6 308 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 SLC25A40Q8TBP6 338 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 CCDC120Q96HB5 630 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 TUBG2Q9NRH3 451 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 CRIM1Q9NZV1 1036 aa15.58■□□□□ 0.08
VIM-201ENST00000224237 MEIS3P1A6NDR6 274 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 SOCS1O15524 211 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 GTF2F2P13984 249 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 HIST1H1DP16402 221 aaKnown RBP15.57■□□□□ 0.08
VIM-201ENST00000224237 SELEP16581 610 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 GIFP27352 417 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 C3orf36Q3SXR2 165 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 C1orf174Q8IYL3 243 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 ZNF611Q8N823 705 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 MUCL1Q96DR8 90 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 CACNG6Q9BXT2 260 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 BCL2L14Q9BZR8 327 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 PCDHB16Q9NRJ7 776 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 ZNF107Q9UII5 783 aaPredicted RBP15.57■□□□□ 0.08
VIM-201ENST00000224237 ELF5Q9UKW6 265 aaPredicted RBP15.57■□□□□ 0.08
VIM-201ENST00000224237 NUBP2Q9Y5Y2 271 aa15.57■□□□□ 0.08
VIM-201ENST00000224237 ACACBO00763 2458 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms