RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 ZFAND1Q8TCF1 268 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 CDKL2Q92772 493 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 TMEM159Q96B96 161 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 SMARCD1Q96GM5 515 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 Q96MT0 163 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 NAPGQ99747 312 aaPredicted RBP2.62□□□□□ -1.99
NEAT1-205ENST00000616315 TBL1YQ9BQ87 522 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 EXOSC4Q9NPD3 245 aaKnown RBP2.62□□□□□ -1.99
NEAT1-205ENST00000616315 SIRT7Q9NRC8 400 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 HEBP1Q9NRV9 189 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 TMEM100Q9NV29 134 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 ZNHIT6Q9NWK9 470 aaKnown RBP2.62□□□□□ -1.99
NEAT1-205ENST00000616315 RHBDL2Q9NX52 303 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 ENOPH1Q9UHY7 261 aa2.62□□□□□ -1.99
NEAT1-205ENST00000616315 IGLV4-60A0A075B6I1 120 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CENPVL3A0A0U1RRI6 287 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 TVP23AA6NH52 213 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 M0R1X1 148 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 GATBO75879 557 aaKnown RBP2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CCNKO75909 580 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CCNE2O96020 404 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 IGLV3-25P01717 112 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 MMP7P09237 267 aaPredicted RBP2.61□□□□□ -1.99
NEAT1-205ENST00000616315 GALR1P47211 349 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 MTPNP58546 118 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CTAG1AP78358 180 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 DYNC1I2Q13409 638 aaKnown RBP2.61□□□□□ -1.99
NEAT1-205ENST00000616315 C18orf21Q32NC0 220 aaPredicted RBP2.61□□□□□ -1.99
NEAT1-205ENST00000616315 SLC25A35Q3KQZ1 300 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 ABCA11PQ4W5N1 156 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 C5orf47Q569G3 176 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 YIF1BQ5BJH7 314 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 TEX30Q5JUR7 227 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 FAM27D1Q5T7N8 215 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 GUSBP11Q6P575 273 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 ERO1BQ86YB8 467 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CA13Q8N1Q1 262 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CYB561A3Q8NBI2 242 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 OR9A2Q8NGT5 310 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 OR6K2Q8NGY2 324 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 OR1L1Q8NH94 360 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 ZNF461Q8TAF7 563 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 LGALS14Q8TCE9 139 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 TMIGD2Q96BF3 282 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 CDX2Q99626 313 aaPredicted RBP2.61□□□□□ -1.99
NEAT1-205ENST00000616315 C20orf144Q9BQM9 153 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 PRRG3Q9BZD7 231 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 VAPAQ9P0L0 249 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 RAB23Q9ULC3 237 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 LRRC42Q9Y546 428 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 RFNGQ9Y644 331 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 JCADQ9P266 1359 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 NACAE9PAV3 2078 aa2.61□□□□□ -1.99
NEAT1-205ENST00000616315 TNS2Q63HR2 1409 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 IGHV3-49A0A0A0MS15 119 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 TRAV8-6A0A0B4J262 113 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 K7EN84 100 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 K7ERQ8 282 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 M0R1B8 84 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 ZNF593O00488 134 aaPredicted RBP2.6□□□□□ -1.99
NEAT1-205ENST00000616315 YKT6O15498 198 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 PLIN3O60664 434 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 SC5DO75845 299 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 CD74P04233 296 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 MUC1P15941 1255 aaPredicted RBP2.6□□□□□ -1.99
NEAT1-205ENST00000616315 IL1RNP18510 177 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 NPY1RP25929 384 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 PIGHQ14442 188 aaPredicted RBP2.6□□□□□ -1.99
NEAT1-205ENST00000616315 CDNFQ49AH0 187 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 APOBEC3HQ6NTF7 200 aaKnown RBP2.6□□□□□ -1.99
NEAT1-205ENST00000616315 EPGNQ6UW88 154 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 MTERF4Q7Z6M4 381 aaKnown RBP2.6□□□□□ -1.99
NEAT1-205ENST00000616315 OR4D6Q8NGJ1 314 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 SFXN5Q8TD22 340 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 SLC25A46Q96AG3 418 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 SNF8Q96H20 258 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 RNF157Q96PX1 679 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 RNF5Q99942 180 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 NUDT9Q9BW91 350 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 ULBP2Q9BZM5 246 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 COA1Q9GZY4 146 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 ZNF302Q9NR11 478 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 OPN4Q9UHM6 478 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 AP3M1Q9Y2T2 418 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 SCRIBQ14160 1630 aa2.6□□□□□ -1.99
NEAT1-205ENST00000616315 FAM240AA0A1B0GVK7 77 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 MGAT4DA6NG13 374 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 J3QT63 122 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 RRP8O43159 456 aaKnown RBP2.59□□□□□ -1.99
NEAT1-205ENST00000616315 HLA-DQB1P01920 261 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 IGKV3-11P04433 115 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 LIPCP11150 499 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 ZNF32P17041 273 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 PSMB5P28074 263 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 LCN1P31025 176 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 PRSS3P35030 304 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 PRLHRP49683 370 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 RGS6P49758 472 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 SARNPP82979 210 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms