RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 M0R233 179 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 NME2P1O60361 137 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 PLATP00750 562 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 TMEM225BP0DP42 221 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 NME2P22392 152 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 MICBQ29980 383 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 SUMF1Q8NBK3 374 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 SPSB1Q96BD6 273 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 IRF2BPLQ9H1B7 796 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 NOP16Q9Y3C1 178 aaKnown RBP11.86□□□□□ -0.51
NEK3-205ENST00000610828 MMP7P09237 267 aaPredicted RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 CXCL2P19875 107 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 CPT2P23786 658 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 DHODHQ02127 395 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ZNF92Q03936 586 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 CNN3Q15417 329 aaKnown RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 MPPED2Q15777 294 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 THOC7Q6I9Y2 204 aaKnown RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ZDHHC22Q8N966 263 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 FBXW5Q969U6 566 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 TMPRSS13Q9BYE2 586 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 FXYD6-FXYD2A0A087WZ82 144 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ZNF587BE7ETH6 402 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ARPC5O15511 151 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 ANGPTL7O43827 346 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 NOS1APO75052 506 aaPredicted RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 CD46P15529 392 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 GABRR1P24046 479 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 CD34P28906 385 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 SLC25A42Q86VD7 318 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
NEK3-205ENST00000610828 DEFB124Q8NES8 71 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 OCSTAMPQ9BR26 566 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 LINC00470Q9BZP3 86 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 FXYD6Q9H0Q3 95 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
NEK3-205ENST00000610828 RGS11O94810 467 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 NRASP01111 189 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 AKR1C4P17516 323 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 RBP2P50120 134 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 SEC61A1P61619 476 aaKnown RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 FAM3AP98173 230 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 PPP1R1AQ13522 171 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 EXOSC2Q13868 293 aaKnown RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 OPCMLQ14982 345 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 NRN1LQ496H8 165 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 LY6G6FQ5SQ64 297 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 NAXEQ8NCW5 288 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 MARCH1Q8TCQ1 289 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 BORCS8Q96FH0 119 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 TM2D1Q9BX74 207 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 PECRQ9BY49 303 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 ZNF230Q9UIE0 474 aaPredicted RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 IGKV1-27A0A075B6S5 117 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 MCRIP1C9JLW8 97 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 IFNA7P01567 189 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 CSTBP04080 98 aaKnown RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 AMY2BP19961 511 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 C4BPBP20851 252 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 CCNOP22674 350 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 VAMP1P23763 118 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 CBX5P45973 191 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 FOXG1P55316 489 aaPredicted RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 ARG2P78540 354 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 IL13RA1P78552 427 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 SLC10A1Q14973 349 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 RSU1Q15404 277 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 PIP4P1Q86T03 277 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 ADAD2Q8NCV1 583 aaKnown RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 CPNE2Q96FN4 548 aaPredicted RBP11.84□□□□□ -0.51
NEK3-205ENST00000610828 RGCCQ9H4X1 137 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 LDAHQ9H6V9 325 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 FN3KRPQ9HA64 309 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 LIPGQ9Y5X9 500 aa11.84□□□□□ -0.51
NEK3-205ENST00000610828 ZFHX4Q86UP3 3567 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 HTR3BO95264 441 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 CFDP00746 253 aaPredicted RBP11.83□□□□□ -0.52
NEK3-205ENST00000610828 PRKACBP22694 351 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 ZBTB25P24278 435 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 GMFBP60983 142 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 SORDQ00796 357 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 GK2Q14410 553 aaPredicted RBP11.83□□□□□ -0.52
NEK3-205ENST00000610828 ACTBL2Q562R1 376 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 NKAPLQ5M9Q1 402 aa11.83□□□□□ -0.52
NEK3-205ENST00000610828 LIN54Q6MZP7 749 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms