RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 OGFRL1Q5TC84 451 aaPredicted RBP13.96□□□□□ -0.17
SSBP4-213ENST00000602088 ZNF691Q5VV52 312 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 TTC23Q5W5X9 447 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 TMEM42Q69YG0 159 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 ZNF841Q6ZN19 808 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 KCTD8Q6ZWB6 473 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 MOB3CQ70IA8 216 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 DOK3Q7L591 496 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 NLRC3Q7RTR2 1065 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 SCCPDHQ8NBX0 429 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 OR8B3Q8NGG8 313 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 LRRC29Q8WV35 223 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 RPL3LQ92901 407 aaKnown RBP13.96□□□□□ -0.17
SSBP4-213ENST00000602088 OR8B2Q96RD0 313 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 SSBP3Q9BWW4 388 aaPredicted RBP13.96□□□□□ -0.17
SSBP4-213ENST00000602088 MYRFQ9Y2G1 1151 aa13.96□□□□□ -0.17
SSBP4-213ENST00000602088 RPL36Q9Y3U8 105 aaKnown RBP13.96□□□□□ -0.17
SSBP4-213ENST00000602088 SRRM5B3KS81 715 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 ZNF732B4DXR9 585 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.95□□□□□ -0.18
SSBP4-213ENST00000602088 CLIC3O95833 236 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 FADS2O95864 444 aaKnown RBP13.95□□□□□ -0.18
SSBP4-213ENST00000602088 NRASP01111 189 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 IGHA1P01876 353 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 ACTA2P62736 377 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 GNB2P62879 340 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 GNG3P63215 75 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 ACTG2P63267 376 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 PAX2Q02962 417 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 RAB40BQ12829 278 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 GALEQ14376 348 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 KLHL22Q53GT1 634 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 CLVS2Q5SYC1 327 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 LHFPL3Q86UP9 236 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 FAM90A1Q86YD7 464 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 DHRSXQ8N5I4 330 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 OR10Z1Q8NGY1 313 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 OR2G2Q8NGZ5 317 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 C7orf69Q9H7B7 122 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 CLN8Q9UBY8 286 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 OPN4Q9UHM6 478 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 INSIG2Q9Y5U4 225 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 COL6A5A8TX70 2615 aa13.95□□□□□ -0.18
SSBP4-213ENST00000602088 LOC105371242A0A075B767 164 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 IGHV3OR15-7A0A075B7D8 119 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 A0A1B0GVI7 797 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 OR5B21A6NL26 309 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 SYT7O43581 403 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 MUC1P15941 1255 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-213ENST00000602088 SMN1Q16637 294 aaKnown RBP13.94□□□□□ -0.18
SSBP4-213ENST00000602088 MICBQ29980 383 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 PLCXD3Q63HM9 321 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 WDR25Q64LD2 544 aaPredicted RBP13.94□□□□□ -0.18
SSBP4-213ENST00000602088 FDX2Q6P4F2 183 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 EGFL6Q8IUX8 553 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 TEX29Q8N6K0 151 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 CCDC54Q8NEL0 328 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 OR52I1Q8NGK6 324 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 PELI1Q96FA3 418 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 MRPL48Q96GC5 212 aaKnown RBP13.94□□□□□ -0.18
SSBP4-213ENST00000602088 C4orf36Q96KX1 117 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 ZNF649Q9BS31 505 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 OR51I2Q9H344 312 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 CTSZQ9UBR2 303 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 OR5V1Q9UGF6 321 aa13.94□□□□□ -0.18
SSBP4-213ENST00000602088 A6NIN4 97 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 J3QLW9 94 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ADAM20O43506 726 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 GYPAP02724 150 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 UBCP0CG48 685 aaKnown RBP13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ZNF12P17014 697 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ZNF19P17023 458 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 NPY4RP50391 375 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 NANOS3P60323 173 aaKnown RBP13.93□□□□□ -0.18
SSBP4-213ENST00000602088 C1QL2Q7Z5L3 287 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 SYS1Q8N2H4 156 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 CNIH3Q8TBE1 160 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
SSBP4-213ENST00000602088 SEH1LQ96EE3 360 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 MYCBPQ99417 103 aaPredicted RBP13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ADI1Q9BV57 179 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ALG8Q9BVK2 526 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 INPP5EQ9NRR6 644 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 GPR173Q9NS66 373 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ERVK13-1Q9NX77 482 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 ERVK-18Q9QC07 812 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 KAAG1Q9UBP8 84 aa13.93□□□□□ -0.18
SSBP4-213ENST00000602088 NKX1-2Q9UD57 310 aaPredicted RBP13.93□□□□□ -0.18
SSBP4-213ENST00000602088 LOC107986453A0A1B0GWG9 222 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 ERICH4A6NGS2 130 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 H3BSH0 61 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 AKR7A2O43488 359 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 RHBDL1O75783 438 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 HTR1AP08908 422 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 ADRA2CP18825 462 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 CCR9P51686 369 aa13.92□□□□□ -0.18
SSBP4-213ENST00000602088 TMEM244Q5VVB8 128 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms