RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SS18L1O75177 396 aaPredicted RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 LPLP06858 475 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 PTGFRP43088 359 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR3A2P47893 321 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 VEGFCP49767 419 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 GSK3AP49840 483 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 RAB1AP62820 205 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 FAM3AP98173 230 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 RIPPLY1Q0D2K3 151 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 BTN2A1Q7KYR7 527 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 LIX1LQ8IVB5 337 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 AQP3Q92482 292 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 LPAR5Q9H1C0 372 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 C20orf85Q9H1P6 137 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 NKIRAS2Q9NYR9 191 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 PTPRZ1P23471 2315 aaPredicted RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 hCG_38984A0A1B0GV85 526 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CDC14BO60729 498 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 MPC2O95563 127 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 MPIG6BO95866 241 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 PLATP00750 562 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CSF1P09603 554 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 H2AFB2P0C5Z0 115 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 PSMB1P20618 241 aaKnown RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 STOMP27105 288 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 MPGP29372 298 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF260Q3ZCT1 412 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 SLC22A6Q4U2R8 563 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CLVS2Q5SYC1 327 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 RAB12Q6IQ22 244 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 COLCA1Q6ZS62 124 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 Q6ZTK2 550 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR2W3Q7Z3T1 314 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF584Q8IVC4 421 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CHST4Q8NCG5 386 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR11H7Q8NGC8 314 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR4C16Q8NGL9 310 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR1K1Q8NGR3 316 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR8S1Q8NH09 359 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 DVL3Q92997 716 aaPredicted RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CYYR1Q96J86 154 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CLEC4MQ9H2X3 399 aaPredicted RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 RGCCQ9H4X1 137 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 ATPIF1Q9UII2 106 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CRTAPO75718 401 aaPredicted RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 DHFRP00374 187 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CD3DP04234 171 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 GTF2F2P13984 249 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 GNB3P16520 340 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 RAB14P61106 215 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CTAG1AP78358 180 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 NHLH1Q02575 133 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 GSG1Q2KHT4 349 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 LINC00303Q3SY05 128 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 CDNFQ49AH0 187 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 PNLDC1Q8NA58 520 aaKnown RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 KCNG3Q8TAE7 436 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 BCL2L2Q92843 193 aaPredicted RBP8.16□□□□□ -1.1
LINC00838-201ENST00000562956 SELENOIQ9C0D9 397 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 OR10A4Q9H209 315 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 GHITMQ9H3K2 345 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 TAS2R8Q9NYW2 309 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF391Q9UJN7 358 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 MGAQ8IWI9 3026 aa8.16□□□□□ -1.1
LINC00838-201ENST00000562956 FREM1Q5H8C1 2179 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 SULT1C2O00338 296 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 ARR3P36575 388 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.1
LINC00838-201ENST00000562956 TFAP2EQ6VUC0 442 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 OR10K1Q8NGX5 313 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 OR10R2Q8NGX6 335 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 OR56B4Q8NH76 319 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 TNFAIP8L1Q8WVP5 186 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 RBPMSQ93062 196 aaKnown RBP8.15□□□□□ -1.1
LINC00838-201ENST00000562956 SPSB4Q96A44 273 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 MS4A3Q96HJ5 214 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 SCNM1Q9BWG6 230 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 TMEM59Q9BXS4 323 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 PPA2Q9H2U2 334 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 SCPEP1Q9HB40 452 aa8.15□□□□□ -1.1
LINC00838-201ENST00000562956 IGKV1-27A0A075B6S5 117 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 RPS10-NUDT3A0A1W2PQS6 291 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 C7orf66A4D0T2 115 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 SOCS1O15524 211 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 XRCC2O43543 280 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 RGS11O94810 467 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 COX5BP10606 129 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 MTCP1P56278 107 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 ACTBP60709 375 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 ACTG1P63261 375 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 SSBP1Q04837 148 aaKnown RBP8.15□□□□□ -1.11
LINC00838-201ENST00000562956 GUSBP1Q15486 140 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 OR8B8Q15620 311 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 GRK1Q15835 563 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 TMEM42Q69YG0 159 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 FAM214BQ7L5A3 538 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 FGD2Q7Z6J4 655 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms