RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.96□□□□□ -2.1
SCFD1-219ENST00000556413 ARGLU1Q9NWB6 273 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-219ENST00000556413 PTBP2Q9UKA9 531 aaKnown RBP1.96□□□□□ -2.1
SCFD1-219ENST00000556413 CES1P1Q9UKY3 287 aa1.96□□□□□ -2.1
SCFD1-219ENST00000556413 TIMM22Q9Y584 194 aa1.96□□□□□ -2.1
SCFD1-219ENST00000556413 SOX21Q9Y651 276 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-219ENST00000556413 KCNE3Q9Y6H6 103 aa1.96□□□□□ -2.1
SCFD1-219ENST00000556413 TLN2Q9Y4G6 2542 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 RTTNQ86VV8 2226 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PHF3Q92576 2039 aaKnown RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GNG14A0A1W2PPG7 69 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FAM159BA6NKW6 160 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 SMIM23A6NLE4 172 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 A8MT66 165 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GOLGA8RI6L899 631 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 AP3B1O00203 1094 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 MANBAO00462 879 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FADS1O60427 444 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 SS18L1O75177 396 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF189O75820 626 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CBR3O75828 277 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 C2P06681 752 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TCN1P20061 433 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GABRA3P34903 492 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 SRP14P37108 136 aaKnown RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TMED10P49755 219 aaKnown RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 HNMTP50135 292 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FABP6P51161 128 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CAV2P51636 162 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PLTPP55058 493 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 DSCR4P56555 118 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF117Q03924 483 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 IFT88Q13099 833 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GANABQ14697 944 aaKnown RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GUSBP1Q15486 140 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ZSWIM7Q19AV6 140 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TMEM176BQ3YBM2 270 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 HIKESHIQ53FT3 197 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 AGKQ53H12 422 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 NCMAPQ5T1S8 102 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 HBMQ6B0K9 141 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 NIPAL1Q6NVV3 410 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CLEC2AQ6UVW9 174 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CBLN3Q6UW01 205 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 C12orf54Q6X4T0 127 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 BHLHA15Q7RTS1 189 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FAM9CQ8IZT9 166 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PDIK1LQ8N165 341 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 UBE2J2Q8N2K1 259 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CADM2Q8N3J6 435 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TCAIMQ8N3R3 496 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 RNF10Q8N5U6 811 aaKnown RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FADS6Q8N9I5 356 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TMEM185AQ8NFB2 350 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OR5D16Q8NGK9 328 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OR6K3Q8NGY3 331 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OR5AK3PQ8NH89 298 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PSMA8Q8TAA3 256 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 AGR3Q8TD06 166 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GPR151Q8TDV0 419 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GPR119Q8TDV5 335 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 C16orf78Q8WTQ4 265 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PYROXD1Q8WU10 500 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 MAIP1Q8WWC4 291 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PHYHIPQ92561 330 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OSTF1Q92882 214 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CDS1Q92903 461 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 MARC2Q969Z3 335 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF681Q96N22 645 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TMEM237Q96Q45 408 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OR5B2Q96R09 309 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 SLC39A3Q9BRY0 314 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CENPKQ9BS16 269 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 TBL1XR1Q9BZK7 514 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OR11A1Q9GZK7 315 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 STMN4Q9H169 189 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 OR51B6Q9H340 312 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 GLIPR2Q9H4G4 154 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ELOVL6Q9H5J4 265 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 METTL17Q9H7H0 456 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 DDX18Q9NVP1 670 aaKnown RBP1.95□□□□□ -2.1
SCFD1-219ENST00000556413 QPCTLQ9NXS2 382 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 NINJ2Q9NZG7 142 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF639Q9UID6 485 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF225Q9UK10 706 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PCTPQ9UKL6 214 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 PYCARDQ9ULZ3 195 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FZR1Q9UM11 496 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 SNX12Q9UMY4 172 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 FKBP7Q9Y680 259 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 EML6Q6ZMW3 1958 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 CR1P17927 2039 aa1.95□□□□□ -2.1
SCFD1-219ENST00000556413 COL6A5A8TX70 2615 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ATRQ13535 2644 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PRR14LQ5THK1 2151 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 GOLGA6L10A6NI86 522 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 OR6C70A6NIJ9 312 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CLDN24A6NM45 220 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 E7ESA3 106 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 H0YIV9 168 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms