RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 IFNA7P01567 189 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 PI3P19957 117 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 GSK3AP49840 483 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 NPY4RP50391 375 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 BAMBIQ13145 260 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 NKAPLQ5M9Q1 402 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 ST8SIA4Q92187 359 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 TIMM10BQ9Y5J6 103 aa13.21□□□□□ -0.3
USP35-204ENST00000530267 HTR3BO95264 441 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 GSTP1P09211 210 aaKnown RBP13.2□□□□□ -0.3
USP35-204ENST00000530267 UBBP0CG47 229 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 CCL2P13500 99 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 PPP3CBP16298 524 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
USP35-204ENST00000530267 IL13RA1P78552 427 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 PDSS1Q5T2R2 415 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 KCTD9Q7L273 389 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 C6orf201Q7Z4U5 140 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 SLC7A10Q9NS82 523 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 SLC2A8Q9NY64 477 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 ZNF581Q9P0T4 197 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 ABI3Q9P2A4 366 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
USP35-204ENST00000530267 ARID1AO14497 2285 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 OR6C6A6NF89 314 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 MFNGO00587 321 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 NAT2P11245 290 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 CLDN18P56856 261 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 PABPC1L2AQ5JQF8 200 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 JMJD6Q6NYC1 403 aaPredicted RBP13.2□□□□□ -0.3
USP35-204ENST00000530267 SLC25A42Q86VD7 318 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 BATF2Q8N1L9 274 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 B3GNT2Q9NY97 397 aa13.2□□□□□ -0.3
USP35-204ENST00000530267 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 LEUTXA8MZ59 168 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 HPNP05981 417 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 AMY2BP19961 511 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 OR3A3P47888 321 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 DHODHQ02127 395 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 ZNF92Q03936 586 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 RIPPLY1Q0D2K3 151 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 THOC7Q6I9Y2 204 aaKnown RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 NUDT16L1Q9BRJ7 211 aaKnown RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 KCNN3Q9UGI6 736 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 C9orf170A2RU37 121 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 ZNF806P0C7X5 589 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 ZBTB25P24278 435 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 EIF3IQ13347 325 aaKnown RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 LYG2Q86SG7 212 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 CDC6Q99741 560 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 HDHD3Q9BSH5 251 aaPredicted RBP13.19□□□□□ -0.3
USP35-204ENST00000530267 PECRQ9BY49 303 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 PRR13Q9NZ81 148 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
USP35-204ENST00000530267 SNU13P55769 128 aaKnown RBP13.18□□□□□ -0.3
USP35-204ENST00000530267 ARF1P84077 181 aaKnown RBP13.18□□□□□ -0.3
USP35-204ENST00000530267 ATXN7L3Q14CW9 347 aaPredicted RBP13.18□□□□□ -0.3
USP35-204ENST00000530267 TRIP6Q15654 476 aaKnown RBP13.18□□□□□ -0.3
USP35-204ENST00000530267 RIPPLY2Q5TAB7 128 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 FAM89BQ8N5H3 189 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 TMPRSS13Q9BYE2 586 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 MAB21L2Q9Y586 359 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 TRAV14DV4A0A0A6YYC5 116 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 ARGFXA6NJG6 315 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 ZNF587BE7ETH6 402 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 EFSO43281 561 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 FARS2O95363 451 aaKnown RBP13.18□□□□□ -0.3
USP35-204ENST00000530267 NRASP01111 189 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 HLA-HP01893 362 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 S100A11P31949 105 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 MEOX1P50221 254 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 HLXQ14774 488 aaPredicted RBP13.18□□□□□ -0.3
USP35-204ENST00000530267 RSU1Q15404 277 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 MPPED2Q15777 294 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 TAF9Q16594 264 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 ALKAL2Q6UX46 152 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 C3P1Q6ZMU1 363 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 OR5M8Q8NGP6 311 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 OR5H2Q8NGV7 314 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 TERB2Q8NHR7 220 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 PLEKHJ1Q9NW61 149 aa13.18□□□□□ -0.3
USP35-204ENST00000530267 POM121CA8CG34 1229 aa13.17□□□□□ -0.3
USP35-204ENST00000530267 SYNGR4O95473 234 aa13.17□□□□□ -0.3
USP35-204ENST00000530267 ZNF708P17019 499 aa13.17□□□□□ -0.3
USP35-204ENST00000530267 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
USP35-204ENST00000530267 OR3A2P47893 321 aa13.17□□□□□ -0.3
USP35-204ENST00000530267 GMFBP60983 142 aa13.17□□□□□ -0.3
USP35-204ENST00000530267 PPIAP62937 165 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms