RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 OR5AS1Q8N127 324 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 ZNF808Q8N4W9 903 aaPredicted RBP7.33□□□□□ -1.24
VAPB-206ENST00000520497 OR4M1Q8NGD0 313 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 SYNPRQ8TBG9 265 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 UBASH3BQ8TF42 649 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 SSC4DQ8WTU2 575 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 CA5BP1Q8WTZ4 195 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 RFT1Q96AA3 541 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 SPSB1Q96BD6 273 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 COX4I2Q96KJ9 171 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 WFIKKN1Q96NZ8 548 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 ABCG5Q9H222 651 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 PCDHB16Q9NRJ7 776 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 RHBDL2Q9NX52 303 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 PTTG3PQ9NZH4 202 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 SLC7A11Q9UPY5 501 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 PIGLQ9Y2B2 252 aa7.33□□□□□ -1.24
VAPB-206ENST00000520497 DSCAMO60469 2012 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 IGKV1-9A0A0C4DH69 117 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 ZNF816-ZNF321PA0A0X1KG74 233 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 A6NIN4 97 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CENPXA8MT69 81 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 M0R1B8 84 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CTDSPLO15194 276 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 ZG16O60844 167 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CLDN14O95500 239 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 PAHP00439 452 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 FAM157BP0CG42 384 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 PRF1P14222 555 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 RAC2P15153 192 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 PTAFRP25105 342 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CD40P25942 277 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 ZNF93P35789 620 aaPredicted RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 RAD52P43351 418 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 POU3F4P49335 361 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 AP3S2P59780 193 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 ERVS71-1P61550 626 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 NKX6-1P78426 367 aaPredicted RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 HLXQ14774 488 aaPredicted RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 P2RY14Q15391 338 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 ZNF79Q15937 498 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CLVS2Q5SYC1 327 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 ZNF57Q68EA5 555 aaPredicted RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 AWAT2Q6E213 333 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 RAB12Q6IQ22 244 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 FAM166AQ6J272 317 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 TMEM108Q6UXF1 575 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 OR2W3Q7Z3T1 314 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 C1orf174Q8IYL3 243 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CENPSQ8N2Z9 138 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 DNAAF1Q8NEP3 725 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 CSNK2A3Q8NEV1 391 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 OR56B2PQ8NGI1 322 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 OR5H6Q8NGV6 325 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 PTX4Q96A99 478 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 HAVCR1Q96D42 359 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 LRRC46Q96FV0 321 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 MARS2Q96GW9 593 aaKnown RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 BCL2L14Q9BZR8 327 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 SLC22A4Q9H015 551 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 OR51B6Q9H340 312 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 KCNJ16Q9NPI9 418 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 NPDC1Q9NQX5 325 aaPredicted RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 GHRLQ9UBU3 117 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 OR5V1Q9UGF6 321 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 KCNN3Q9UGI6 736 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 RHBDD3Q9Y3P4 386 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 DYSFO75923 2080 aa7.32□□□□□ -1.24
VAPB-206ENST00000520497 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
VAPB-206ENST00000520497 A0A0G2JMP0 313 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 A0A0X1KG70 313 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 DPRXA6NFQ7 191 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 GGT3PA6NGU5 568 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CD300LBA8K4G0 201 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 LCE2BO14633 110 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 GMDSO60547 372 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 ECDO95905 644 aaPredicted RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 HLA-DQB1P01920 261 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CRYAAP02489 173 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 GSTT2BP0CG30 244 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 MPV17P39210 176 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 MNDAP41218 407 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 MMP15P51511 669 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CLDN12P56749 244 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 ASAH1Q13510 395 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 GPR176Q14439 515 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 UBE2V2Q15819 145 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 TMEM255AQ5JRV8 349 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 SPATA46Q5T0L3 261 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 MBNL2Q5VZF2 373 aaKnown RBP7.31□□□□□ -1.24
VAPB-206ENST00000520497 CRIP3Q6Q6R5 217 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 LHFPL2Q6ZUX7 228 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 WFDC8Q8IUA0 241 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 NAV2Q8IVL1 2488 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 CMTM4Q8IZR5 234 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 OR4M2Q8NGB6 313 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 OR51D1Q8NGF3 324 aa7.31□□□□□ -1.24
VAPB-206ENST00000520497 OR1J1Q8NGS3 322 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms