RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ZNRF1Q8ND25 227 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 MUC13Q9H3R2 512 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 PPP1R3EQ9H7J1 279 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 C19orf12Q9NSK7 152 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 CD300AQ9UGN4 299 aa12.98□□□□□ -0.33
DDX56-210ENST00000479440 TBL2Q9Y4P3 447 aaKnown RBP12.98□□□□□ -0.33
DDX56-210ENST00000479440 TSSC4Q9Y5U2 329 aaPredicted RBP12.98□□□□□ -0.33
DDX56-210ENST00000479440 SYNGR1O43759 233 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 SMIM11AP58511 58 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 COL10A1Q03692 680 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 LYPD4Q6UWN0 246 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 LHFPL4Q7Z7J7 247 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 OR5AU1Q8NGC0 362 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 OR52L1Q8NGH7 329 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 OR5P3Q8WZ94 311 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 SGK3Q96BR1 496 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 ATP6V1G3Q96LB4 118 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 FUZQ9BT04 418 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 OR10A2Q9H208 303 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 RGCCQ9H4X1 137 aa12.97□□□□□ -0.33
DDX56-210ENST00000479440 GMPR2Q9P2T1 348 aaKnown RBP12.97□□□□□ -0.33
DDX56-210ENST00000479440 IGKV1D-17A0A075B6S4 117 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 PSG2P11465 335 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 HOXD3P31249 432 aaPredicted RBP12.96□□□□□ -0.33
DDX56-210ENST00000479440 FMO3P31513 532 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 IFNGR2P38484 337 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 SLC25A1P53007 311 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 RPL31P62899 125 aaKnown RBP12.96□□□□□ -0.33
DDX56-210ENST00000479440 TMEM95Q3KNT9 176 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 KLHL12Q53G59 568 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 RCN3Q96D15 328 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 SDSLQ96GA7 329 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 DNAJC27Q9NZQ0 273 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
DDX56-210ENST00000479440 ZNF222Q9UK12 451 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 TENM3Q9P273 2699 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 COL7A1Q02388 2944 aa12.96□□□□□ -0.33
DDX56-210ENST00000479440 TCRBV4S1A1TA0A5B7 111 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 DHRS12A0PJE2 317 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 H3BUI4 141 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 DIRAS1O95057 198 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 GADD45GO95257 159 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 ARG1P05089 322 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 NHLRC4P0CG21 123 aaPredicted RBP12.95□□□□□ -0.34
DDX56-210ENST00000479440 DCTDP32321 178 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 ZNF121P58317 390 aaPredicted RBP12.95□□□□□ -0.34
DDX56-210ENST00000479440 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 FAM76BQ5HYJ3 339 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 RPL13AP3Q6NVV1 102 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 ZNF782Q6ZMW2 699 aaPredicted RBP12.95□□□□□ -0.34
DDX56-210ENST00000479440 CCDC121Q6ZUS5 278 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 THAP5Q7Z6K1 395 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 TIGD4Q8IY51 512 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 ZDHHC23Q8IYP9 409 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 OR4X2Q8NGF9 303 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 OR51L1Q8NGJ5 315 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 PGAM5Q96HS1 289 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 RNF170Q96K19 258 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 HIST1H2AAQ96QV6 131 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 SAR1AQ9NR31 198 aa12.95□□□□□ -0.34
DDX56-210ENST00000479440 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
DDX56-210ENST00000479440 C3orf84H3BNL1 204 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 SLC1A7O00341 560 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 ZNF593O00488 134 aaPredicted RBP12.94□□□□□ -0.34
DDX56-210ENST00000479440 NME4O00746 187 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 CST4P01036 141 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 NCK1P16333 377 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 AZGP1P25311 298 aaKnown RBP12.94□□□□□ -0.34
DDX56-210ENST00000479440 RAB13P51153 203 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 DYNLT3P51808 116 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 EIF2B1Q14232 305 aaKnown RBP12.94□□□□□ -0.34
DDX56-210ENST00000479440 KHDC1LQ5JSQ8 128 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 PRSS45Q7RTY3 260 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 DYNAPQ8N1N2 210 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 OR13D1Q8NGV5 346 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 ZNRF4Q8WWF5 429 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 C7orf34Q96L11 122 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 KCTD14Q9BQ13 255 aaPredicted RBP12.94□□□□□ -0.34
DDX56-210ENST00000479440 C1orf21Q9H246 121 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 U3KQK5 164 aa12.94□□□□□ -0.34
DDX56-210ENST00000479440 ODF3BA8MYP8 253 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 RHBDL1O75783 438 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 CCL3L1P16619 93 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 GSSP48637 474 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 BLVRAP53004 296 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 BLCAPP62952 87 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 TSPAN31Q12999 210 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 SSX2Q16385 188 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 TMEM200BQ69YZ2 307 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 CALHM1Q8IU99 346 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 ZNF561Q8N587 486 aa12.93□□□□□ -0.34
DDX56-210ENST00000479440 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms