RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SNX31Q8N9S9 440 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR6K2Q8NGY2 324 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC7A13Q8TCU3 470 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 GLYATL2Q8WU03 294 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ARPC1AQ92747 370 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 LRRC58Q96CX6 371 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ECHDC3Q96DC8 303 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 PIK3IP1Q96FE7 263 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 DCUN1D1Q96GG9 259 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 TEX37Q96LM6 180 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 RARRES2Q99969 163 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 OSBPL10Q9BXB5 764 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR11A1Q9GZK7 315 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 DEFB127Q9H1M4 99 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 Q9H521 79 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ELOVL6Q9H5J4 265 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 C11orf49Q9H6J7 331 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 RDH14Q9HBH5 336 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 FGF20Q9NP95 211 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCNB1IP1Q9NPC3 277 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 HEBP1Q9NRV9 189 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ARMC1Q9NVT9 282 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 HRASLS2Q9NWW9 162 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 XCL2Q9UBD3 114 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 CLN8Q9UBY8 286 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 NUFIP1Q9UHK0 495 aaKnown RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 TBC1D24Q9ULP9 559 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ING4Q9UNL4 249 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 HS3ST2Q9Y278 367 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 DOCK3Q8IZD9 2030 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 PLXNA3P51805 1871 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 IGLV3-16A0A075B6K0 115 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LOC730098B7Z3J9 87 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 H3BNH8 94 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 MANBAO00462 879 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 TXNDC9O14530 226 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCL16O15467 120 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 STK16O75716 305 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CLPXO76031 633 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 TSPAN13O95857 204 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LY6G6DO95868 133 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 HPNP05981 417 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR56A5P0C7T3 313 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 GKN3PP0CG01 181 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 GSTM3P21266 225 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZBTB25P24278 435 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 HTR1EP28566 365 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CD1BP29016 333 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCR7P32248 378 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCR2P41597 374 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 SPINT3P49223 89 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CSNK1EP49674 416 aaKnown RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PRPS1P60891 318 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 SEMG2Q02383 582 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CAPRIN1Q14444 709 aaKnown RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CLINT1Q14677 625 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 MRPL23Q16540 153 aaKnown RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 TTLL9Q3SXZ7 439 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 ATP6AP1LQ52LC2 224 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LRRC10Q5BKY1 277 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 VAX1Q5SQQ9 334 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 C6orf52Q5T4I8 152 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PIP5KL1Q5T9C9 394 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 SPINK14Q6IE38 97 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LCN8Q6JVE9 175 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 ANKRD26P1Q6NSI1 321 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 NANOGP8Q6NSW7 305 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 C22orf39Q6P5X5 142 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 RFLNAQ6ZTI6 216 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 ARPINQ7Z6K5 226 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 ST13P4Q8IZP2 240 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 JAGN1Q8N5M9 183 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 TTC29Q8NA56 475 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LKAAEAR1Q8TD35 194 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 NAT14Q8WUY8 206 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 DCUN1D4Q92564 292 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 TCEAL4Q96EI5 215 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 MED8Q96G25 268 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PPP3R2Q96LZ3 170 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 C1orf50Q9BV19 199 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 BBS2Q9BXC9 721 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 LINC00597Q9H2U6 94 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR51M1Q9H341 326 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 NANOGQ9H9S0 305 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PARVBQ9HBI1 364 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 RPS10P5Q9NQ39 176 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 UBAP1Q9NZ09 502 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PDP1Q9P0J1 537 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 OPTCQ9UBM4 332 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PEF1Q9UBV8 284 aaKnown RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCL26Q9Y258 94 aa3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 CHTOPQ9Y3Y2 248 aaKnown RBP3.41□□□□□ -1.86
HMGB3P18-201ENST00000406327 PATJQ8NI35 1801 aa3.4□□□□□ -1.86
HMGB3P18-201ENST00000406327 CASP8AP2Q9UKL3 1982 aa3.4□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRAV39A0A0B4J263 110 aa3.4□□□□□ -1.87
HMGB3P18-201ENST00000406327 DHRS12A0PJE2 317 aa3.4□□□□□ -1.87
HMGB3P18-201ENST00000406327 TSPAN11A1L157 253 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms