RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 K7EPK0 472 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 RRP8O43159 456 aaKnown RBP16.79■□□□□ 0.28
RTN4-201ENST00000317610 RBMXP38159 391 aaKnown RBP16.79■□□□□ 0.28
RTN4-201ENST00000317610 ZNF41P51814 821 aaPredicted RBP16.79■□□□□ 0.28
RTN4-201ENST00000317610 RAB5BP61020 215 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 FAM3AP98173 230 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 ARL6IP1Q15041 203 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 HMGN3Q15651 99 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 OPN5Q6U736 354 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 Q6ZRG5 221 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 SHISA6Q6ZSJ9 500 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 SLC16A14Q7RTX9 510 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 PLXDC1Q8IUK5 500 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 FAM71E2Q8N5Q1 922 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 SDHAF3Q9NRP4 125 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 FBXL17Q9UF56 701 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 KPTNQ9Y664 436 aa16.79■□□□□ 0.28
RTN4-201ENST00000317610 EIF3GO75821 320 aaKnown RBP eCLIP16.78■□□□□ 0.284e-6■■■□□ 15.9
RTN4-201ENST00000317610 EN2P19622 333 aaPredicted RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 BLVRBP30043 206 aaPredicted RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 FOXL2P58012 376 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 ACY1Q03154 408 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 HGFACQ04756 655 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 CHRFAM7AQ494W8 412 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 ZNF283Q8N7M2 679 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 KDF1Q8NAX2 398 aaPredicted RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 MAFIPQ8WZ33 124 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 ZNF501Q96CX3 271 aaPredicted RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 SHDQ96IW2 340 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 CHRDQ9H2X0 955 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 AMDHD2Q9Y303 409 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 E9PLN8 166 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 FCGR2CP31995 323 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 THBS4P35443 961 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 SMAD4Q13485 552 aaKnown RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 ZNF239Q16600 458 aaKnown RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 RTL6Q6ICC9 239 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 ANKRD37Q7Z713 158 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 THAP3Q8WTV1 239 aaPredicted RBP16.78■□□□□ 0.28
RTN4-201ENST00000317610 LYZL4Q96KX0 146 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 PRRX2Q99811 253 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 ARV1Q9H2C2 271 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 DECR2Q9NUI1 292 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 PPP4R1LQ9P1A2 415 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 STARD10Q9Y365 291 aa16.78■□□□□ 0.28
RTN4-201ENST00000317610 ADAMTS20P59510 1910 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 KNG1P01042 644 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 CTSDP07339 412 aaPredicted RBP16.77■□□□□ 0.28
RTN4-201ENST00000317610 ACAA1P09110 424 aaPredicted RBP16.77■□□□□ 0.28
RTN4-201ENST00000317610 PTAFRP25105 342 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 SWI5Q1ZZU3 235 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 RNF212Q495C1 297 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 FNDC9Q8TBE3 224 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 STT3BQ8TCJ2 826 aa16.77■□□□□ 0.28
RTN4-201ENST00000317610 AGPAT2O15120 278 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 OR8U9P0C7N5 309 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 PTGDSP41222 190 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 DEFB119Q8N690 84 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 UBAC2Q8NBM4 344 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 OR8U1Q8NH10 309 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 SLC25A43Q8WUT9 341 aaPredicted RBP16.76■□□□□ 0.27
RTN4-201ENST00000317610 OXGR1Q96P68 337 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 MESP1Q9BRJ9 268 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 B3GALT1Q9Y5Z6 326 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 IGKV1D-8A0A087WSZ0 117 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 CRYM-AS1A6NIL9 109 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 ZNF814B7Z6K7 855 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 ID4P47928 161 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 UCP2P55851 309 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 TMEM33P57088 247 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 HNRNPKP61978 463 aaKnown RBP eCLIP16.76■□□□□ 0.276e-10■□□□□ 9.3
RTN4-201ENST00000317610 SMCO1Q147U7 214 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 CARD17Q5XLA6 110 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 FOXRED2Q8IWF2 684 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 OR5D18Q8NGL1 313 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 HIST1H2BAQ96A08 127 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 CRB3Q9BUF7 120 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 SLC7A5P2Q9GIP4 190 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 KLRF1Q9NZS2 232 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 V9GYS6 101 aa16.76■□□□□ 0.27
RTN4-201ENST00000317610 IGLV3-12A0A075B6K2 115 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 C5orf63A6NC05 138 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 DUX1O43812 170 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 QDPRP09417 244 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 CPT2P23786 658 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 Q6ZSR3 168 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 SYT13Q7L8C5 426 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 COMMD1Q8N668 190 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 SEMA6DQ8NFY4 1073 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 C14orf79Q96F83 325 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 LIN37Q96GY3 246 aaPredicted RBP16.75■□□□□ 0.27
RTN4-201ENST00000317610 AKR1E2Q96JD6 320 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 CLCC1Q96S66 551 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 PLEKHA2Q9HB19 425 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 C5orf52A6NGY3 159 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 METTL12A8MUP2 240 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 STMND1H3BQB6 276 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 SMAD2Q15796 467 aaKnown RBP16.75■□□□□ 0.27
RTN4-201ENST00000317610 KMT5CQ86Y97 462 aa16.75■□□□□ 0.27
RTN4-201ENST00000317610 SULF2Q8IWU5 870 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms