RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 H3BMQ9 156 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CTAG2O75638 210 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 ARL6IP5O75915 188 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CDRT1O95170 752 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 NRASP01111 189 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OR4A8P0C604 315 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 DANCRP0C864 163 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 PRF1P14222 555 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 SELEP16581 610 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 FAHP16930 419 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CA6P23280 308 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 GCH1P30793 250 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 GATA4P43694 442 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MTNR1BP49286 362 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CAV3P56539 151 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 GFOD2Q3B7J2 385 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CEACAM21Q3KPI0 293 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 TIMM50Q3ZCQ8 353 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 ZNF672Q499Z4 452 aaPredicted RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 HSD17B12Q53GQ0 312 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 SPRNQ5BIV9 151 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 C1orf100Q5SVJ3 147 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CLVS2Q5SYC1 327 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 FAM166AQ6J272 317 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 RGS7BPQ6MZT1 257 aaPredicted RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 VHLLQ6RSH7 139 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 ASCL4Q6XD76 172 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MOB3CQ70IA8 216 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MRPL21Q7Z2W9 205 aaKnown RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 C1QL2Q7Z5L3 287 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 TPRA1Q86W33 373 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CDH26Q8IXH8 852 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 CSNK2A3Q8NEV1 391 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 KBTBD8Q8NFY9 601 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OR1M1Q8NGA1 313 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OR56B2PQ8NGI1 322 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OR5A2Q8NGI9 324 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OR51A2Q8NGJ7 313 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 DYNC2LI1Q8TCX1 351 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 RAB2BQ8WUD1 216 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OR5P3Q8WZ94 311 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MRPL24Q96A35 216 aaKnown RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 SLC25A28Q96A46 364 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 KCTD7Q96MP8 289 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 DHRS9Q9BPW9 319 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 BARHL1Q9BZE3 327 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 FAM192AQ9GZU8 254 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 TPK1Q9H3S4 243 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 OPA3Q9H6K4 179 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 PLEKHF2Q9H8W4 249 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 EXOSC4Q9NPD3 245 aaKnown RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 TMEM100Q9NV29 134 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 TAS2R4Q9NYW5 299 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MRPL15Q9P015 296 aaKnown RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 PLEKHB1Q9UF11 243 aaPredicted RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 RSL24D1Q9UHA3 163 aaKnown RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 AK6Q9Y3D8 172 aaKnown RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 RNF115Q9Y4L5 304 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 MPC1Q9Y5U8 109 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 PMF1-BGLAPU3KQ54 211 aa5.07□□□□□ -1.6
USP39-213ENST00000467885 USP9XQ93008 2570 aaPredicted RBP5.07□□□□□ -1.6
USP39-213ENST00000467885 FAM208BQ5VWN6 2430 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 IGKV1-27A0A075B6S5 117 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 ZNF816-ZNF321PA0A0X1KG74 233 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 A0A1W2PPW3 197 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PQLC2LA1A4F0 135 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 A1L4Q6 167 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 SLC22A1O15245 554 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 MLNRO43193 412 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PTBP3O95758 552 aaKnown RBP5.06□□□□□ -1.6
USP39-213ENST00000467885 IL1AP01583 271 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 MAS1P04201 325 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 CD2P06729 351 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 ADH4P08319 380 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 NAT2P11245 290 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 ZNF182P17025 639 aaPredicted RBP5.06□□□□□ -1.6
USP39-213ENST00000467885 RAB3AP20336 220 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 MAPK3P27361 379 aaPredicted RBP5.06□□□□□ -1.6
USP39-213ENST00000467885 CALRP27797 417 aaKnown RBP5.06□□□□□ -1.6
USP39-213ENST00000467885 THBS2P35442 1172 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PMELP40967 661 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PSMD7P51665 324 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 FUT6P51993 359 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 KLF3P57682 345 aaPredicted RBP5.06□□□□□ -1.6
USP39-213ENST00000467885 OR10A3P58181 314 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PRDX4Q13162 271 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 MAB21L1Q13394 359 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 EFNB3Q15768 340 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 MOGQ16653 247 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 ANGPTL5Q86XS5 388 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 ZCCHC24Q8N2G6 241 aaKnown RBP5.06□□□□□ -1.6
USP39-213ENST00000467885 DNAAF1Q8NEP3 725 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 OR52N4Q8NGI2 321 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 OR13G1Q8NGZ3 307 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 NDNFQ8TB73 568 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 UBASH3BQ8TF42 649 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 IGFBPL1Q8WX77 278 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PP6455Q8WZ26 134 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 GTF3AQ92664 365 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms