RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 EGR1P18146 543 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 THBS2P35442 1172 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 CDONQ4KMG0 1287 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 ESCO2Q56NI9 601 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 WDR82Q6UXN9 313 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 DCDC5Q6ZRR9 648 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 THAP5Q7Z6K1 395 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 CATSPERDQ86XM0 798 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 GCSAMQ8N6F7 178 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 BOLLQ8N9W6 283 aaKnown RBP10.8□□□□□ -0.68
COL5A1-206ENST00000465877 OR4M2Q8NGB6 313 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 RHOXF1Q8NHV9 184 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 OR5P3Q8WZ94 311 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 PIGCQ92535 297 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 RORBQ92753 470 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 ITFG2Q969R8 447 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 LGALS12Q96DT0 336 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 Q96MT0 163 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 FGF23Q9GZV9 251 aaPredicted RBP10.8□□□□□ -0.68
COL5A1-206ENST00000465877 TLNRD1Q9H1K6 362 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 TMEM165Q9HC07 324 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 ENPP5Q9UJA9 477 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 SLC22A13Q9Y226 551 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 PIGLQ9Y2B2 252 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 EXOGQ9Y2C4 368 aaKnown RBP10.8□□□□□ -0.68
COL5A1-206ENST00000465877 DNHD1Q96M86 4753 aa10.8□□□□□ -0.68
COL5A1-206ENST00000465877 ATRQ13535 2644 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 OOEPA6NGQ2 149 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 DHRS7CA6NNS2 312 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 C3orf80F5H4A9 247 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 CASQ2O14958 399 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 MTRF1O75570 445 aaKnown RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 CLIC3O95833 236 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 CCL1P22362 96 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 ZFP36P26651 326 aaKnown RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 ACTA2P62736 377 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 ACTG2P63267 376 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 ODF4Q2M2E3 257 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 WDR38Q5JTN6 314 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 CEP78Q5JTW2 689 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 OGFRL1Q5TC84 451 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 ZNF691Q5VV52 312 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 DCAF12L2Q5VW00 463 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 PLCXD3Q63HM9 321 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 KCTD8Q6ZWB6 473 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 NLRC3Q7RTR2 1065 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 KRT74Q7RTS7 529 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 PRSS35Q8N3Z0 413 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 ACBD7Q8N6N7 88 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 OR8B3Q8NGG8 313 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 LRRC29Q8WV35 223 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 CYGBQ8WWM9 190 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 NEIL1Q96FI4 390 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 OR8B2Q96RD0 313 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 SSBP3Q9BWW4 388 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-206ENST00000465877 PLEKHA1Q9HB21 404 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 MIOXQ9UGB7 285 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 V9GYS6 101 aa10.79□□□□□ -0.68
COL5A1-206ENST00000465877 A0A1B0GTI1 187 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 A0A1B0GVI7 797 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 LOC107986453A0A1B0GWG9 222 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 DAPL1A0PJW8 107 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 OR5B21A6NL26 309 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 LGALS8O00214 317 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 PHF1O43189 567 aaPredicted RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 WBP4O75554 376 aaKnown RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 IGHA1P01876 353 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 UBCP0CG48 685 aaKnown RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 GATA3P23771 443 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 SRP14P37108 136 aaKnown RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 PSMB10P40306 273 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 KIR3DL2P43630 455 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 PITPNBP48739 271 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 GPM6AP51674 278 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 ELF3P78545 371 aaPredicted RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 RAB40BQ12829 278 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 KCNJ8Q15842 424 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 SFRP4Q6FHJ7 346 aaPredicted RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 Q6ZSR3 168 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 DOK3Q7L591 496 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 C11orf53Q8IXP5 236 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 DEFB108BQ8NET1 73 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 RPL3LQ92901 407 aaKnown RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 ADI1Q9BV57 179 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 ALG8Q9BVK2 526 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 TMPRSS13Q9BYE2 586 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 METTL17Q9H7H0 456 aaPredicted RBP10.78□□□□□ -0.68
COL5A1-206ENST00000465877 DCLRE1BQ9H816 532 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 RNPEPL1Q9HAU8 725 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 AMBNQ9NP70 447 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 TRIM36Q9NQ86 728 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 OR5V1Q9UGF6 321 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 MYRFQ9Y2G1 1151 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 PCDHGB1Q9Y5G3 927 aa10.78□□□□□ -0.68
COL5A1-206ENST00000465877 IGHV3OR15-7A0A075B7D8 119 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 TRAV38-1A0A0B4J264 116 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 PPIAL4CA0A0B4J2A2 164 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 SRRM5B3KS81 715 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms