RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SRP9P49458 86 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RAB9AP51151 201 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RAB2AP61019 212 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RAP1BP61224 184 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MAD2L1Q13257 205 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 BIKQ13323 160 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MFAP5Q13361 173 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 ELAVL1Q15717 326 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 HAGHQ16775 308 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SP5Q6BEB4 398 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 GLYATQ6IB77 296 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SLC48A1Q6P1K1 146 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RNASEKQ6P5S7 137 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 PLXDC2Q6UX71 529 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 BAIAP2L2Q6UXY1 529 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 C3P1Q6ZMU1 363 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 Q6ZSR9 355 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SLC16A14Q7RTX9 510 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 PEG10Q86TG7 708 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SERPINA11Q86U17 422 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 FAM58AQ8N1B3 248 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 BEST3Q8N1M1 668 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SVBPQ8N300 66 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RBMXL3Q8N7X1 1067 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 LINC01356Q8N9X3 169 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 APCDD1LQ8NCL9 501 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM104Q8NE00 496 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 NFAM1Q8NET5 270 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 OR52E4Q8NGH9 312 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 OR14A16Q8NHC5 309 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MRGPRDQ8TDS7 321 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 C16orf78Q8WTQ4 265 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 SSMEM1Q8WWF3 244 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MAFIPQ8WZ33 124 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 PIGCQ92535 297 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RAB39BQ96DA2 213 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 LCORQ96JN0 433 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 TSSK2Q96PF2 358 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 DUX5Q96PT3 197 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 OR2M2Q96R28 347 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MBOAT4Q96T53 435 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CMSS1Q9BQ75 279 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 HES7Q9BYE0 225 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MFFQ9GZY8 342 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MMP28Q9H239 520 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 UBTD1Q9HAC8 227 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CACYBPQ9HB71 228 aaKnown RBP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 LRTM1Q9HBL6 345 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 ADAP2Q9NPF8 381 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 MTCH1Q9NZJ7 389 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 VAPAQ9P0L0 249 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 KLHL13Q9P2N7 655 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 TMED7Q9Y3B3 224 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 GOLT1BQ9Y3E0 138 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 RAP2CQ9Y3L5 183 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 PUS1Q9Y606 427 aaKnown RBP eCLIP3.99□□□□□ -1.77
SF3B1-202ENST00000409915 CDH10Q9Y6N8 788 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 V9GYQ6 96 aa3.99□□□□□ -1.77
SF3B1-202ENST00000409915 COL6A6A6NMZ7 2263 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 YLPM1P49750 1951 aaKnown RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 DOCK10Q96BY6 2186 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TRAV24A0A0B4J272 114 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM218A2RU14 115 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 A6NNC1 897 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 COLCA2A8K830 154 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 G3V3Q6 166 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 K7EP13 123 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 M0R233 179 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 NR5A2O00482 541 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 IMPA2O14732 288 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 BCKDKO14874 412 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SURF4O15260 269 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 RGS14O43566 566 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SLC28A2O43868 658 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF354AO60765 605 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 FAM20BO75063 409 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 GATBO75879 557 aaKnown RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 GPR75O95800 540 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 PPBPP02775 128 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 MT-ND2P03891 347 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CLPSP04118 112 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 METTL15P1P0C7V9 234 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SULT1A3P0DMM9 295 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SULT1A4P0DMN0 295 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CPN1P15169 458 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 BMP7P18075 431 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 SDC1P18827 310 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 NPR2P20594 1047 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 NT5EP21589 574 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CHATP28329 748 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CD80P33681 288 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 MAS1LP35410 378 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 CLDN15P56746 228 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ARG2P78540 354 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 IGLV3-21P80748 117 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF763Q0D2J5 394 aa3.98□□□□□ -1.77
SF3B1-202ENST00000409915 KLRB1Q12918 225 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms