RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 ZNF561Q8N587 486 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 FGF14Q92915 247 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 RTN4RQ9BZR6 473 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 A0A0U1RQK1 487 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 CYB5BO43169 146 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 CRABP1P29762 137 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 RHEBQ15382 184 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 LPCAT3Q6P1A2 487 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 PGAP1Q75T13 922 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 SLC30A7Q8NEW0 376 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 TOLLIPQ9H0E2 274 aa16.37■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZDBF2Q9HCK1 2354 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 RBMXL2O75526 392 aaKnown RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 ANKRD55Q3KP44 614 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 RPUSD3Q6P087 351 aaKnown RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 SLC25A42Q86VD7 318 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF383Q8NA42 475 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 LYRM4Q9HD34 91 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 FAM212BQ9NTI7 297 aaPredicted RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 SUSD2Q9UGT4 822 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 PHYHO14832 338 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 DUS4LO95620 317 aaKnown RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 CXCL10P02778 98 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 KLK2P20151 261 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 EGR4Q05215 589 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 EGR3Q06889 387 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 PPA1Q15181 289 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 RNF128Q8TEB7 428 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 INTS12Q96CB8 462 aaKnown RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF442Q9H7R0 627 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 GDE1Q9NZC3 331 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 TRAV36DV7A0A075B6V5 113 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 PHF1O43189 567 aaPredicted RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 FAHP16930 419 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 GSK3AP49840 483 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 HIST2H3PS2Q5TEC6 136 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 C19orf47Q8N9M1 422 aaKnown RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 UBALD1Q8TB05 177 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 SCARF2Q96GP6 870 aaPredicted RBP16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF251Q9BRH9 671 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 SLC5A7Q9GZV3 580 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 METTL7AQ9H8H3 244 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 LUZP4Q9P127 313 aa16.36■□□□□ 0.21
GTF2IP1-210ENST00000622829 LILRB3O75022 631 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 IFNA4P05014 189 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 CD63P08962 238 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 ALDH3B1P43353 468 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 C9orf135Q5VTT2 229 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 HIST1H2BAQ96A08 127 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 SSX3Q99909 188 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 MESP1Q9BRJ9 268 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 UBE2J1Q9Y385 318 aaPredicted RBP16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 A0A1B0GV90 55 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 RAB27BO00194 218 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF749O43361 778 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 RPS16P62249 146 aaKnown RBP16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 GNMTQ14749 295 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 MRPL24Q96A35 216 aaKnown RBP16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 PBOV1Q9GZY1 135 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 OR51B6Q9H340 312 aa16.35■□□□□ 0.21
GTF2IP1-210ENST00000622829 HLA-HP01893 362 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 AFF3P51826 1226 aaKnown RBP16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 HAS2Q92819 552 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF524Q96C55 264 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 SCGB3A2Q96PL1 93 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 FAM117AQ9C073 453 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 COA4Q9NYJ1 87 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 IGHV3-15A0A0B4J1V0 119 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 SPRY1O43609 319 aaPredicted RBP16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 DBHP09172 617 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 COL9A1P20849 921 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 NOVA1P51513 510 aaKnown RBP16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 TAS2R31P59538 309 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 RAP1AP62834 184 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF528Q3MIS6 628 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ALKBH2Q6NS38 261 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 UQCC3Q6UW78 93 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ASB17Q8WXJ9 295 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 C11orf40Q8WZ69 217 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 SH3BGRL3Q9H299 93 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF160Q9HCG1 818 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 RCC2Q9P258 522 aaKnown RBP16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ICAM5Q9UMF0 924 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 TRBV5-5A0A0J9YX44 114 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 ZNF724A8MTY0 619 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 NDUFA2O43678 99 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 GUSBP08236 651 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 HERV-K104P61576 105 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 MRPS34P82930 218 aaKnown RBP16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 NHLH2Q02577 135 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 HABP2Q14520 560 aaPredicted RBP16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 OR2B11Q5JQS5 317 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 LANCL3Q6ZV70 420 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 SEC11CQ9BY50 192 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 PDE7BQ9NP56 450 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 PADI1Q9ULC6 663 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 R4GMQ9 66 aa16.34■□□□□ 0.21
GTF2IP1-210ENST00000622829 A0A087WZY1 265 aa16.33■□□□□ 0.21
GTF2IP1-210ENST00000622829 SOX15O60248 233 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms