RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 UBAC2Q8NBM4 344 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 HPSE2Q8WWQ2 592 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 DOCK3Q8IZD9 2030 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 MFNGO00587 321 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 QDPRP09417 244 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 DAOP14920 347 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 TMEM33P57088 247 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 TMEM41BQ5BJD5 291 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 DMRTC1Q5HYR2 192 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 NCMAPQ5T1S8 102 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 AADACL3Q5VUY0 350 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 SEMA6DQ8NFY4 1073 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 PSMF1Q92530 271 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 GPR173Q9NS66 373 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 A0A1W2PPV4 95 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ZNF727A8MUV8 499 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ERGP11308 486 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 RAB5AP20339 215 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 PNLIPRP2P54317 469 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 PCBD1P61457 104 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 RPS4Y2Q8TD47 263 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 ZNF775Q96BV0 537 aaPredicted RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 PIPOXQ9P0Z9 390 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 CACNA1IQ9P0X4 2223 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 A8MXE2 369 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 H0YIG0 161 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ACAA2P42765 397 aaKnown RBP13.11□□□□□ -0.31
VPS36-207ENST00000611132 KIAA0895LQ68EN5 471 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 SUCNR1Q9BXA5 334 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 PLK3Q9H4B4 646 aa13.11□□□□□ -0.31
VPS36-207ENST00000611132 ZNF217O75362 1048 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 RECKO95980 971 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 HLA-HP01893 362 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 P04436 131 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 MSX1P28360 303 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 DRD3P35462 400 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 NPBWR1P48145 328 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 FMODQ06828 376 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 C9orf152Q5JTZ5 239 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 LCN15Q6UWW0 184 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
VPS36-207ENST00000611132 TLNRD1Q9H1K6 362 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 IGKV1-8A0A0C4DH67 115 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 SSSCA1O60232 199 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 NAT2P11245 290 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
VPS36-207ENST00000611132 SP6Q3SY56 376 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 GPR119Q8TDV5 335 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 CRLF2Q9HC73 371 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 KLF4O43474 513 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 MSR1P21757 451 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 RBP2P50120 134 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 PLGLB1Q02325 96 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 ZNF117Q03924 483 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 HNF4GQ14541 408 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 MSMO1Q15800 293 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 PABPC1L2AQ5JQF8 200 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 FAM209BQ5JX69 171 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 ZNF429Q86V71 674 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 HEXA-AS1Q9H8Q6 139 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 WDR81Q562E7 1941 aa13.1□□□□□ -0.31
VPS36-207ENST00000611132 EPPINO95925 133 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 PSMB3P49720 205 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 TCTN1Q2MV58 587 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 SLC16A14Q7RTX9 510 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 ATG4DQ86TL0 474 aaPredicted RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 ZSCAN4Q8NAM6 433 aaPredicted RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 SDSLQ96GA7 329 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 PATZ1Q9HBE1 687 aaKnown RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 TRBV5-5A0A0J9YX44 114 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 FTCDNL1E5RQL4 147 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 MPGP29372 298 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 CST9LP1Q5W188 147 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 JMJD6Q6NYC1 403 aaPredicted RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 ATRAIDQ6UW56 229 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 AKR7LQ8NHP1 331 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 VSTM2LQ96N03 204 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 RCL1Q9Y2P8 373 aaKnown RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 FAM221AA4D161 298 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 FABP4P15090 132 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 CD38P28907 300 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 EIF1P41567 113 aaKnown RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 GSK3AP49840 483 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 TMEM255AQ5JRV8 349 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 PRAMEF20Q5VT98 475 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 OR2A2Q6IF42 318 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
VPS36-207ENST00000611132 PRR13Q9NZ81 148 aa13.09□□□□□ -0.31
VPS36-207ENST00000611132 WSB1Q9Y6I7 421 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms