RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SGK3Q96BR1 496 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 UQCC2Q9BRT2 126 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 B3GNT2Q9NY97 397 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 V9GYS6 101 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 NCOA6Q14686 2063 aaPredicted RBP8.21□□□□□ -1.09
LINC00838-201ENST00000562956 CEP250Q9BV73 2442 aa8.21□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF407Q9C0G0 2248 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 TRAV6A0A075B6T7 132 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 TRAV17A0A0B4J275 112 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 TOXO94900 526 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 FAHP16930 419 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 MRPS10P82664 201 aaKnown RBP8.21□□□□□ -1.1
LINC00838-201ENST00000562956 DYRK1AQ13627 763 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 FCN2Q15485 313 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 MOGAT2Q3SYC2 334 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 NRN1LQ496H8 165 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 TMEM255AQ5JRV8 349 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 PAQR4Q8N4S7 273 aaPredicted RBP8.21□□□□□ -1.1
LINC00838-201ENST00000562956 CPEB3Q8NE35 698 aaKnown RBP8.21□□□□□ -1.1
LINC00838-201ENST00000562956 OR52H1Q8NGJ2 320 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 OR2AE1Q8NHA4 323 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 CREB3L1Q96BA8 519 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.1
LINC00838-201ENST00000562956 SLC22A20A6NK97 555 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 FARS2O95363 451 aaKnown RBP8.2□□□□□ -1.1
LINC00838-201ENST00000562956 IGHG3P01860 377 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 ERCC1P07992 297 aaPredicted RBP8.2□□□□□ -1.1
LINC00838-201ENST00000562956 PER3P56645 1201 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 RRAS2P62070 204 aaPredicted RBP8.2□□□□□ -1.1
LINC00838-201ENST00000562956 QRFPP83859 136 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 GUCA2AQ02747 115 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 PMPCAQ10713 525 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 UNC119Q13432 240 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 PABPC1L2AQ5JQF8 200 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 ANGPTL5Q86XS5 388 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF100Q8IYN0 542 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 C15orf40Q8WUR7 153 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 FAM46BQ96A09 425 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 C12orf49Q9H741 205 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 HRASLSQ9HDD0 168 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 NUDT15Q9NV35 164 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 UPB1Q9UBR1 384 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 KLK13Q9UKR3 277 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 PIGLQ9Y2B2 252 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 ANKRD20A5PA0PJZ0 165 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF503-AS2A6NEH8 195 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 OR6C65A6NJZ3 312 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 INMT-MINDY4F8WBC2 141 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 KLK10O43240 276 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 GMDSO60547 372 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 LCATP04180 440 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 HCKP08631 526 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 VSIG8P0DPA2 414 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 SPINK2P20155 84 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 AGTR1P30556 359 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 OR3A4PP47883 348 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 PRSS12P56730 875 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 Q6ZSR3 168 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF627Q7L945 461 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 NPRL2Q8WTW4 380 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 MARC2Q969Z3 335 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 CACNG6Q9BXT2 260 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 DPAGT1Q9H3H5 408 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 BEX1Q9HBH7 125 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 PRSS50Q9UI38 385 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 U3KQ87 197 aa8.2□□□□□ -1.1
LINC00838-201ENST00000562956 MEIS3P1A6NDR6 274 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 BPNT1O95861 308 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ECDO95905 644 aaPredicted RBP8.19□□□□□ -1.1
LINC00838-201ENST00000562956 HLA-HP01893 362 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 TCRBP04435 133 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ACKR3P25106 362 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 HLA-DMAP28067 261 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ZNF81P51508 661 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 UBE2V2Q15819 145 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 AANATQ16613 207 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 AWAT2Q6E213 333 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 FAAP20Q6NZ36 180 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ACBD4Q8NC06 268 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 SSC4DQ8WTU2 575 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 PTX4Q96A99 478 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 REEP6Q96HR9 211 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ZMAT3Q9HA38 289 aaKnown RBP8.19□□□□□ -1.1
LINC00838-201ENST00000562956 RDH8Q9NYR8 311 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ELF5Q9UKW6 265 aaPredicted RBP8.19□□□□□ -1.1
LINC00838-201ENST00000562956 H7C417 338 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 ALDOBP05062 364 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 RAB6AP20340 208 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 AP3S2P59780 193 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 SFRP4Q6FHJ7 346 aaPredicted RBP8.19□□□□□ -1.1
LINC00838-201ENST00000562956 OR11H4Q8NGC9 324 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 PRDM14Q9GZV8 571 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 NOX3Q9HBY0 568 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 MTFP1Q9UDX5 166 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 RAB22AQ9UL26 194 aa8.19□□□□□ -1.1
LINC00838-201ENST00000562956 WIPF3A6NGB9 483 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms