RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	FCGR2A	P12318	317 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF32	P17041	273 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	C4BPB	P20851	252 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	PRKACB	P22694	351 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	HIST1H3A	P68431	136 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	FOXO1	Q12778	655 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	SLC10A1	Q14973	349 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ARL6IP1	Q15041	203 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZMYND11	Q15326	602 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	LINC00303	Q3SY05	128 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ACTBL2	Q562R1	376 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF766	Q5HY98	468 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	HIST2H3PS2	Q5TEC6	136 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF774	Q6NX45	483 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	FAAP20	Q6NZ36	180 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	TMEM53	Q6P2H8	277 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	C11orf88	Q6PI97	169 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	HIST2H3A	Q71DI3	136 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	P4HA3	Q7Z4N8	544 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	FJX1	Q86VR8	437 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	TMEM251	Q8N6I4	163 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	STEAP2	Q8NFT2	490 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	SEMA6D	Q8NFY4	1073 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR56B1	Q8NGI3	324 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	GRPEL2	Q8TAA5	225 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZFAND1	Q8TCF1	268 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	GPX8	Q8TED1	209 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	NPRL2	Q8WTW4	380 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	TNFAIP8L1	Q8WVP5	186 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	APH1A	Q96BI3	265 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	REEP6	Q96HR9	211 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	PRRT1	Q99946	306 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	HES7	Q9BYE0	225 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	LINC00470	Q9BZP3	86 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	GHITM	Q9H3K2	345 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	RGCC	Q9H4X1	137 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	CALHM2	Q9HA72	323 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	GHRL	Q9UBU3	117 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	DNAJC13	O75165	2243 aa		9.45	□□□□□ -0.9
SPIDR-222	ENST00000524006	DHRS7C	A6NNS2	312 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	SNRPGP15	A8MWD9	76 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	ITGB2	P05107	769 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	IL5	P05113	134 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	FCER2	P06734	321 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	GSTP1	P09211	210 aa	Known RBP	9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	FAH	P16930	419 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF708	P17019	499 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	TBP	P20226	339 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR3A4P	P47883	348 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	LHX2	P50458	406 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	FAP	Q12884	760 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	ARFRP1	Q13795	201 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	STK11	Q15831	433 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	CDNF	Q49AH0	187 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	SCGB2B2	Q4G0G5	96 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	SLC22A6	Q4U2R8	563 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	C4orf46	Q504U0	113 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	RTL6	Q6ICC9	239 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR10K2	Q6IF99	312 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	GLDN	Q6ZMI3	551 aa	Predicted RBP	9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	MDS2	Q8NDY4	140 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	BEST4	Q8NFU0	473 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR10R2	Q8NGX6	335 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR14K1	Q8NGZ2	314 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	AKR7L	Q8NHP1	331 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF431	Q8TF32	576 aa	Predicted RBP	9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	NANOS1	Q8WY41	292 aa	Known RBP	9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	FBXO17	Q96EF6	278 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	RNF170	Q96K19	258 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	SPACA5	Q96QH8	159 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	TMEM246	Q9BRR3	403 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	TRAF4	Q9BUZ4	470 aa	Predicted RBP	9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	OR2H1	Q9GZK4	316 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	CHST5	Q9GZS9	411 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	FBLN5	Q9UBX5	448 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006		V9GYS6	101 aa		9.44	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF407	Q9C0G0	2248 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	IGKV3D-15	A0A087WSY6	115 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	TMEM82	A0PJX8	343 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	LDLRAD4	O15165	306 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	XRCC2	O43543	280 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	SYNGR3	O43761	229 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	CDC14B	O60729	498 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	CD3D	P04234	171 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	CSN2	P05814	226 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	CELA3A	P09093	270 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	SULT1A3	P0DMM9	295 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	SULT1A4	P0DMN0	295 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	VSIG8	P0DPA2	414 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	SERPINA2	P20848	420 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	DNASE1	P24855	282 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	CBX5	P45973	191 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	GZMK	P49863	264 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	CLDN18	P56856	261 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	PLP2	Q04941	152 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	RIPPLY1	Q0D2K3	151 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	TNK1	Q13470	666 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	BCL2A1	Q16548	175 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	NRN1L	Q496H8	165 aa		9.43	□□□□□ -0.9
SPIDR-222	ENST00000524006	ZNF529	Q6P280	563 aa		9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms