RNA–Protein interactions for RNA: ENST00000515857.1

HIGD1AP3-201, Transcript of HIG1 hypoxia inducible domain family member 1A pseudogene 3, humanhuman

BASIC

Gene HIGD1AP3, Length 278 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1AP3-201ENST00000515857 C6orf50Q9HD87 102 aa3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RMND1Q9NWS8 449 aa3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 BTNL2Q9UIR0 455 aa3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SCML1Q9UN30 329 aa3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 TSSC4Q9Y5U2 329 aaPredicted RBP3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 MTCL1Q9Y4B5 1905 aaKnown RBP3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CSPG4Q6UVK1 2322 aa3.2□□□□□ -1.9
HIGD1AP3-201ENST00000515857 LCTP09848 1927 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CSMD1Q96PZ7 3565 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 IGLV7-46A0A075B6I9 117 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 IGKV6-21A0A0C4DH24 114 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RBMY1BA6NDE4 496 aaKnown RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RBMY1EA6NEQ0 496 aaKnown RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 FABP12A6NFH5 140 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SMIM23A6NLE4 172 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 A8MXK9 166 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 F8VP50 259 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 IDH3BO43837 385 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ALOX12BO75342 701 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ATP5HO75947 161 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SEMA4FO95754 770 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 GCGP01275 180 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CATP04040 527 aaKnown RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 TACSTD2P09758 323 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR8U9P0C7N5 309 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RBMY1DP0C7P1 496 aaKnown RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 PATE4P0C8F1 98 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RBMY1A1P0DJD3 496 aaKnown RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 LAMP1P11279 417 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ZNF250P15622 560 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 KLK2P20151 261 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 GSK3BP49841 420 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 EMP2P54851 167 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ACVR1Q04771 509 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ALX1Q15699 326 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 TAL2Q16559 108 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 KLF17Q5JT82 389 aaPredicted RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ZNF506Q5JVG8 444 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 VAX1Q5SQQ9 334 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 FAM182AQ5T1J6 154 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RUSC1-AS1Q66K80 236 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 THOC7Q6I9Y2 204 aaKnown RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CNIH2Q6PI25 160 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CD300LGQ6UXG3 332 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ZNF771Q7L3S4 317 aaPredicted RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 LRRC6Q86X45 466 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ATP6V1C2Q8NEY4 427 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR2AP1Q8NGE2 309 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR10R2Q8NGX6 335 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR4Q3Q8NH05 313 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR8U1Q8NH10 309 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR4C6Q8NH72 309 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SPPL2BQ8TCT7 592 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 DOK4Q8TEW6 326 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 FRAT1Q92837 279 aaPredicted RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 FGGYQ96C11 551 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RCN3Q96D15 328 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 OR5M11Q96RB7 305 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 PSMB7Q99436 277 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 FOXC2Q99958 501 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SLC38A1Q9H2H9 487 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 PLGRKTQ9HBL7 147 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 FGF22Q9HCT0 170 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 MIEF1Q9NQG6 463 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 THAP10Q9P2Z0 257 aaPredicted RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 PYGO1Q9Y3Y4 419 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 KIF26AQ9ULI4 1882 aaPredicted RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 MED13Q9UHV7 2174 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 MYH4Q9Y623 1939 aa3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 MN1Q10571 1320 aaPredicted RBP3.19□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CCDC168Q8NDH2 2452 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ATRQ13535 2644 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 IGLV3-22A0A075B6J6 115 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 TRAV8-7A0A075B6U6 113 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 IGHV3OR16-13A0A075B7E8 117 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 IGHV3-16A0A0C4DH30 117 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 A0A1B0GUA9 196 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 A0A1B0GUV1 79 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 GOLGA8IPA6NC78 632 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 A6NIZ1 184 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SMKR1H3BMG3 65 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SMLR1H3BR10 107 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 hCG_2039718K7EN88 272 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 BMPR1BO00238 502 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 TNFSF11O14788 317 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 SNAI2O43623 268 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 DPM1O60762 260 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 TBL1XO60907 577 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 HPRT1P00492 218 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 CSNK2A2P19784 350 aaPredicted RBP3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RAB4AP20338 218 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RAB5AP20339 215 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 AK4P27144 223 aaPredicted RBP3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RPL34P49207 117 aaKnown RBP3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 KLK7P49862 253 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 RORCP51449 518 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 HMGA2P52926 109 aa3.18□□□□□ -1.9
HIGD1AP3-201ENST00000515857 ERVFC1-1P60608 527 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms