RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 OR2AJ1Q8NGZ0 328 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ZNF721Q8TF20 911 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 RAB3CQ96E17 227 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ESRP2Q9H6T0 727 aaKnown RBP7.67□□□□□ -1.18
USP40-203ENST00000427112 C12orf10Q9HB07 376 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 LANCL2Q9NS86 450 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 TAS2R8Q9NYW2 309 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 PTTG3PQ9NZH4 202 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 NXT1Q9UKK6 140 aaKnown RBP7.67□□□□□ -1.18
USP40-203ENST00000427112 CBY3A6NI87 242 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 SULT2B1O00204 365 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 WRBO00258 174 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 OR2J2O76002 312 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 PRH1P02810 166 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ITGB2P05107 769 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 UBBP0CG47 229 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 UBCP0CG48 685 aaKnown RBP7.67□□□□□ -1.18
USP40-203ENST00000427112 LAP3P28838 519 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ANKRD55Q3KP44 614 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 PLAC9Q5JTB6 97 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 CATSPERDQ86XM0 798 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 KCNRGQ8N5I3 272 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 CLRN3Q8NCR9 226 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 SECTM1Q8WVN6 248 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 ZNF837Q96EG3 531 aaPredicted RBP7.67□□□□□ -1.18
USP40-203ENST00000427112 GNRHR2Q96P88 292 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 TXNIPQ9H3M7 391 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 POLE3Q9NRF9 147 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 A0A0A6YYD4 124 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 MS4A18H0YCH9 400 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 OR13C7P0DN81 318 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 FCGR2AP12318 317 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 DUSP1P28562 367 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 TNFRSF4P43489 277 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 MS4A18Q3C1V0 323 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 Q3ZCU0 254 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 FIP1L1Q6UN15 594 aaKnown RBP7.67□□□□□ -1.18
USP40-203ENST00000427112 LYG2Q86SG7 212 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 OR1M1Q8NGA1 313 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 OR5T2Q8NGG2 359 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 STOML3Q8TAV4 291 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 C14orf79Q96F83 325 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 MEGF10Q96KG7 1140 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 LMAN1LQ9HAT1 526 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 GPR173Q9NS66 373 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 RASL12Q9NYN1 266 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 PCOLCE2Q9UKZ9 415 aa7.67□□□□□ -1.18
USP40-203ENST00000427112 C9JQL5 133 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 GP1BAP07359 652 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 POU2F2P09086 479 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 MGMTP16455 207 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 PSMB6P28072 239 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 SLC25A1P53007 311 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 HSD17B7P56937 341 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 SLC26A5P58743 744 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 ARF1P84077 181 aaKnown RBP7.66□□□□□ -1.18
USP40-203ENST00000427112 CFHR1Q03591 330 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 IKZF1Q13422 519 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 LPAL2Q16609 132 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 KIAA0895LQ68EN5 471 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 CLEC18BQ6UXF7 455 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 TFAP2EQ6VUC0 442 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 LINC00518Q8N0U6 118 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 STT3BQ8TCJ2 826 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 TCTN2Q96GX1 697 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 MAGT1Q9H0U3 335 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 LDAHQ9H6V9 325 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 G6PC2Q9NQR9 355 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 TNFSF18Q9UNG2 199 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 PRELID3BQ9Y3B1 194 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 FBXO7Q9Y3I1 522 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 R4GMQ9 66 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 A8MVM7 634 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 H7C1Q1 480 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 BCL2L11O43521 198 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 CYTIPO60759 359 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 CRYBA1P05813 215 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 TMEM225BP0DP42 221 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 EDN3P14138 238 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 MEOX2P50222 304 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 CLDN17P56750 224 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 MYBPHQ13203 477 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 ACOT7LQ6ZUV0 252 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 OR5L1Q8NGL2 311 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 OR5H2Q8NGV7 314 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 OR6K3Q8NGY3 331 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 PGAM5Q96HS1 289 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 TMEM59Q9BXS4 323 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 EIF5A2Q9GZV4 153 aaKnown RBP7.66□□□□□ -1.18
USP40-203ENST00000427112 PPP4R1LQ9P1A2 415 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 PCDHGA1Q9Y5H4 931 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 AUP1Q9Y679 476 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 ABCA1O95477 2261 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 hCG_1809904A0A1W2PP81 198 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 A0A1W2PR64 198 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 A0A1W2PRV1 198 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 EFSO43281 561 aa7.66□□□□□ -1.18
USP40-203ENST00000427112 EFNA2O43921 213 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms