RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C SAT4P25333 603 aaKnown RBP7.77□□□□□ -1.17
UME1YPL139C SHM1P37292 490 aaPredicted RBP7.77□□□□□ -1.17
UME1YPL139C SAH1P39954 449 aaKnown RBP7.77□□□□□ -1.17
UME1YPL139C FIG4P42837 879 aa7.77□□□□□ -1.17
UME1YPL139C IWR1Q07532 353 aaPredicted RBP7.77□□□□□ -1.17
UME1YPL139C VPS3P23643 1011 aa7.76□□□□□ -1.17
UME1YPL139C MRC1P25588 1096 aa7.76□□□□□ -1.17
UME1YPL139C IMG2P25642 146 aaPredicted RBP7.76□□□□□ -1.17
UME1YPL139C VPH1P32563 840 aaKnown RBP7.76□□□□□ -1.17
UME1YPL139C YET1P35723 206 aa7.76□□□□□ -1.17
UME1YPL139C IRC10Q08118 586 aa7.76□□□□□ -1.17
UME1YPL139C GAL10P04397 699 aa7.75□□□□□ -1.17
UME1YPL139C RNR1P21524 888 aaKnown RBP7.75□□□□□ -1.17
UME1YPL139C NOP13P53883 403 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
UME1YPL139C MUB1Q03162 620 aa7.75□□□□□ -1.17
UME1YPL139C TIF35Q04067 274 aaKnown RBP7.75□□□□□ -1.17
UME1YPL139C PRM6Q04705 352 aa7.75□□□□□ -1.17
UME1YPL139C COG4Q06096 861 aa7.75□□□□□ -1.17
UME1YPL139C CWC2Q12046 339 aaPredicted RBP7.75□□□□□ -1.17
UME1YPL139C ECM3Q99252 613 aa7.75□□□□□ -1.17
UME1YPL139C MSP1P28737 362 aa7.74□□□□□ -1.17
UME1YPL139C ISF1P32488 338 aa7.74□□□□□ -1.17
UME1YPL139C COY1P34237 679 aa7.74□□□□□ -1.17
UME1YPL139C RPA49Q01080 415 aaPredicted RBP7.74□□□□□ -1.17
UME1YPL139C SPO75Q07798 868 aa7.74□□□□□ -1.17
UME1YPL139C SDH5Q08230 162 aa7.74□□□□□ -1.17
UME1YPL139C CDC37P06101 506 aaKnown RBP7.73□□□□□ -1.17
UME1YPL139C HMG2P12684 1045 aa7.73□□□□□ -1.17
UME1YPL139C ATE1P16639 503 aa7.73□□□□□ -1.17
UME1YPL139C COX11P19516 300 aaKnown RBP7.73□□□□□ -1.17
UME1YPL139C PEX34P25584 144 aa7.73□□□□□ -1.17
UME1YPL139C GAC1P28006 793 aa7.73□□□□□ -1.17
UME1YPL139C IME2P32581 645 aa7.73□□□□□ -1.17
UME1YPL139C FRE1P32791 686 aa7.73□□□□□ -1.17
UME1YPL139C ADE17P38009 592 aaKnown RBP7.73□□□□□ -1.17
UME1YPL139C DUG2P38149 878 aa7.73□□□□□ -1.17
UME1YPL139C SMC3P47037 1230 aa7.73□□□□□ -1.17
UME1YPL139C YLR297WQ05899 129 aa7.73□□□□□ -1.17
UME1YPL139C CSR1Q06705 408 aaKnown RBP7.73□□□□□ -1.17
UME1YPL139C YPQ1Q12010 308 aa7.73□□□□□ -1.17
UME1YPL139C AI5_BETAQ9ZZX0 354 aa7.73□□□□□ -1.17
UME1YPL139C PRT1P06103 763 aaKnown RBP7.72□□□□□ -1.17
UME1YPL139C RPS6AP0CX37 236 aaKnown RBP7.72□□□□□ -1.17
UME1YPL139C RPS6BP0CX38 236 aaPredicted RBP7.72□□□□□ -1.17
UME1YPL139C DAL2P25335 343 aa7.72□□□□□ -1.17
UME1YPL139C PUP3P25451 205 aaKnown RBP7.72□□□□□ -1.17
UME1YPL139C VBA3P25594 458 aa7.72□□□□□ -1.17
UME1YPL139C RPN12P32496 274 aa7.72□□□□□ -1.17
UME1YPL139C TKL2P33315 681 aa7.72□□□□□ -1.17
UME1YPL139C VBA5P36172 582 aa7.72□□□□□ -1.17
UME1YPL139C MIP6P38760 659 aaKnown RBP7.72□□□□□ -1.17
UME1YPL139C RRM3P38766 723 aa7.72□□□□□ -1.17
UME1YPL139C SFB3P38810 929 aa7.72□□□□□ -1.17
UME1YPL139C DSE1P40077 573 aa7.72□□□□□ -1.17
UME1YPL139C SBE2P42223 864 aaKnown RBP7.72□□□□□ -1.17
UME1YPL139C TAF1P46677 1066 aa7.72□□□□□ -1.17
UME1YPL139C TAD1P53065 400 aa7.72□□□□□ -1.17
UME1YPL139C GIR2Q03768 265 aaPredicted RBP7.72□□□□□ -1.17
UME1YPL139C GFD1Q04839 188 aaKnown RBP7.72□□□□□ -1.17
UME1YPL139C BSP1Q06604 576 aa7.72□□□□□ -1.17
UME1YPL139C BUD20Q08004 166 aaPredicted RBP7.72□□□□□ -1.17
UME1YPL139C GPM2Q12008 311 aa7.72□□□□□ -1.17
UME1YPL139C TUP1P16649 713 aa7.71□□□□□ -1.17
UME1YPL139C SIR1P21691 654 aa7.71□□□□□ -1.17
UME1YPL139C RAD16P31244 790 aa7.71□□□□□ -1.17
UME1YPL139C YKR051WP36142 418 aa7.71□□□□□ -1.17
UME1YPL139C GEM1P39722 662 aa7.71□□□□□ -1.17
UME1YPL139C KAP123P40069 1113 aaKnown RBP7.71□□□□□ -1.17
UME1YPL139C VPS70P47161 811 aa7.71□□□□□ -1.17
UME1YPL139C HFM1P51979 1187 aa7.71□□□□□ -1.17
UME1YPL139C MZM1Q03429 123 aaPredicted RBP7.71□□□□□ -1.17
UME1YPL139C WAR1Q03631 944 aa7.71□□□□□ -1.17
UME1YPL139C TMN2Q04562 672 aa7.71□□□□□ -1.17
UME1YPL139C STE11P23561 717 aa7.71□□□□□ -1.18
UME1YPL139C EFB1P32471 206 aaKnown RBP7.71□□□□□ -1.18
UME1YPL139C ARP1P38696 384 aa7.71□□□□□ -1.18
UME1YPL139C YJR054WP47114 497 aa7.71□□□□□ -1.18
UME1YPL139C UTP8P53276 713 aaKnown RBP7.71□□□□□ -1.18
UME1YPL139C LEE1Q02799 301 aaKnown RBP7.71□□□□□ -1.18
UME1YPL139C STE20Q03497 939 aaKnown RBP7.71□□□□□ -1.18
UME1YPL139C YHM2Q04013 314 aa7.71□□□□□ -1.18
UME1YPL139C HCR1Q05775 265 aaKnown RBP7.71□□□□□ -1.18
UME1YPL139C TSR1Q07381 788 aaKnown RBP7.71□□□□□ -1.18
UME1YPL139C FMP27Q06179 2628 aa7.7□□□□□ -1.18
UME1YPL139C KGD2P19262 463 aaPredicted RBP7.7□□□□□ -1.18
UME1YPL139C PPH22P23595 377 aa7.7□□□□□ -1.18
UME1YPL139C APL1P27351 700 aa7.7□□□□□ -1.18
UME1YPL139C KIP1P28742 1111 aa7.7□□□□□ -1.18
UME1YPL139C CSG2P35206 410 aa7.7□□□□□ -1.18
UME1YPL139C TRZ1P36159 838 aaPredicted RBP7.7□□□□□ -1.18
UME1YPL139C EFM2P38347 419 aa7.7□□□□□ -1.18
UME1YPL139C FHL1P39521 936 aa7.7□□□□□ -1.18
UME1YPL139C RSM25P40496 264 aa7.7□□□□□ -1.18
UME1YPL139C RPS14AP06367 137 aaKnown RBP7.69□□□□□ -1.18
UME1YPL139C XRS2P33301 854 aa7.69□□□□□ -1.18
UME1YPL139C ABZ1P37254 787 aaPredicted RBP7.69□□□□□ -1.18
UME1YPL139C POL12P38121 705 aaPredicted RBP7.69□□□□□ -1.18
UME1YPL139C RPS14BP39516 138 aaKnown RBP7.69□□□□□ -1.18
UME1YPL139C YEL075CP39972 122 aa7.69□□□□□ -1.18
UME1YPL139C YGL036WP53185 909 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms