RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W PES4P39684 611 aa4.72□□□□□ -1.65
RET3YPL010W SIP5P40210 489 aaKnown RBP4.72□□□□□ -1.65
RET3YPL010W RSC8P43609 557 aaKnown RBP4.72□□□□□ -1.65
RET3YPL010W IRC8P47046 822 aa4.72□□□□□ -1.65
RET3YPL010W YGL242CP53066 181 aa4.72□□□□□ -1.65
RET3YPL010W YRB30P53107 440 aaPredicted RBP4.72□□□□□ -1.65
RET3YPL010W YGR053CP53234 283 aa4.72□□□□□ -1.65
RET3YPL010W GTF1P53260 183 aaPredicted RBP4.72□□□□□ -1.65
RET3YPL010W SKG3Q06315 1026 aa4.72□□□□□ -1.65
RET3YPL010W CDC45Q08032 650 aa4.72□□□□□ -1.65
RET3YPL010W RTP1Q12751 981 aa4.72□□□□□ -1.65
RET3YPL010W LAM4P38800 1345 aa4.72□□□□□ -1.65
RET3YPL010W GCD7P32502 381 aaPredicted RBP4.71□□□□□ -1.66
RET3YPL010W YKL151CP36059 337 aa4.71□□□□□ -1.66
RET3YPL010W POA1P38218 177 aa4.71□□□□□ -1.66
RET3YPL010W RTS1P38903 757 aa4.71□□□□□ -1.66
RET3YPL010W SLI1P53304 468 aa4.71□□□□□ -1.66
RET3YPL010W DAK1P54838 584 aaKnown RBP4.71□□□□□ -1.66
RET3YPL010W SLD5Q03406 294 aa4.71□□□□□ -1.66
RET3YPL010W YDR524C-BQ3E6R4 66 aa4.71□□□□□ -1.66
RET3YPL010W YDR034W-BQ6Q5X2 51 aa4.71□□□□□ -1.66
RET3YPL010W PIN4P34217 668 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
RET3YPL010W YKL107WP34251 309 aa4.7□□□□□ -1.66
RET3YPL010W DEF1P35732 738 aaKnown RBP4.7□□□□□ -1.66
RET3YPL010W PLB1P39105 664 aa4.7□□□□□ -1.66
RET3YPL010W VPS8P39702 1274 aa4.7□□□□□ -1.66
RET3YPL010W ZRG8P40021 1076 aa4.7□□□□□ -1.66
RET3YPL010W YGL176CP46945 554 aa4.7□□□□□ -1.66
RET3YPL010W GCV2P49095 1034 aa4.7□□□□□ -1.66
RET3YPL010W SPO20Q04359 397 aa4.7□□□□□ -1.66
RET3YPL010W MRD1Q06106 887 aaKnown RBP4.7□□□□□ -1.66
RET3YPL010W ISA1Q07821 250 aaPredicted RBP4.7□□□□□ -1.66
RET3YPL010W XYL2Q07993 356 aa4.7□□□□□ -1.66
RET3YPL010W OSW2Q12202 724 aa4.7□□□□□ -1.66
RET3YPL010W TAD3Q9URQ3 322 aa4.7□□□□□ -1.66
RET3YPL010W TY1B-AO13527 1196 aaKnown RBP4.69□□□□□ -1.66
RET3YPL010W TFC4P33339 1025 aa4.69□□□□□ -1.66
RET3YPL010W PBY1P38254 753 aa4.69□□□□□ -1.66
RET3YPL010W CHS7P38843 316 aa4.69□□□□□ -1.66
RET3YPL010W RRP8P38961 392 aaKnown RBP4.69□□□□□ -1.66
RET3YPL010W VID27P40157 782 aa4.69□□□□□ -1.66
RET3YPL010W EXG2P52911 562 aa4.69□□□□□ -1.66
RET3YPL010W MLC1P53141 149 aa4.69□□□□□ -1.66
RET3YPL010W SPO1P53541 631 aa4.69□□□□□ -1.66
RET3YPL010W SUN4P53616 420 aa4.69□□□□□ -1.66
RET3YPL010W MDM38Q08179 573 aa4.69□□□□□ -1.66
RET3YPL010W TRM11Q12463 433 aa4.69□□□□□ -1.66
RET3YPL010W RAD61Q99359 647 aa4.69□□□□□ -1.66
RET3YPL010W TOR2P32600 2474 aaKnown RBP4.68□□□□□ -1.66
RET3YPL010W POX1P13711 748 aa4.68□□□□□ -1.66
RET3YPL010W SNA3P14359 133 aa4.68□□□□□ -1.66
RET3YPL010W YUR1P26725 428 aa4.68□□□□□ -1.66
RET3YPL010W CHS3P29465 1165 aa4.68□□□□□ -1.66
RET3YPL010W FUN30P31380 1131 aa4.68□□□□□ -1.66
RET3YPL010W PHO88P38264 188 aaPredicted RBP4.68□□□□□ -1.66
RET3YPL010W ALD5P40047 520 aaKnown RBP4.68□□□□□ -1.66
RET3YPL010W KRI1P42846 591 aaKnown RBP4.68□□□□□ -1.66
RET3YPL010W PHO23P50947 330 aa4.68□□□□□ -1.66
RET3YPL010W HRQ1Q05549 1077 aa4.68□□□□□ -1.66
RET3YPL010W SPH1Q06160 661 aa4.68□□□□□ -1.66
RET3YPL010W CDA1Q06702 301 aa4.68□□□□□ -1.66
RET3YPL010W SAM1P10659 382 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W SAM2P19358 384 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W TKL1P23254 680 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W POT1P27796 417 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
RET3YPL010W RPC82P32349 654 aa4.67□□□□□ -1.66
RET3YPL010W TGL1P34163 548 aa4.67□□□□□ -1.66
RET3YPL010W MCR1P36060 302 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W ECM21P38167 1117 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W OSH3P38713 996 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W YMR147WP40218 223 aaKnown RBP4.67□□□□□ -1.66
RET3YPL010W YIL092WP40497 633 aa4.67□□□□□ -1.66
RET3YPL010W SGM1P47166 707 aa4.67□□□□□ -1.66
RET3YPL010W YGR012WP53206 393 aa4.67□□□□□ -1.66
RET3YPL010W DAP1Q12091 152 aa4.67□□□□□ -1.66
RET3YPL010W ERP3Q12403 225 aa4.67□□□□□ -1.66
RET3YPL010W PDR18P53756 1333 aa4.67□□□□□ -1.66
RET3YPL010W NOT3P06102 836 aaKnown RBP4.66□□□□□ -1.66
RET3YPL010W SWI6P09959 803 aa4.66□□□□□ -1.66
RET3YPL010W ATG19P35193 415 aa4.66□□□□□ -1.66
RET3YPL010W GIC1P38785 314 aa4.66□□□□□ -1.66
RET3YPL010W VPS45P38932 577 aa4.66□□□□□ -1.66
RET3YPL010W URM1P40554 99 aaPredicted RBP4.66□□□□□ -1.66
RET3YPL010W LSB1P53281 241 aa4.66□□□□□ -1.66
RET3YPL010W FOL1P53848 824 aa4.66□□□□□ -1.66
RET3YPL010W GUD1Q07729 489 aa4.66□□□□□ -1.66
RET3YPL010W TAH18Q12181 623 aa4.66□□□□□ -1.66
RET3YPL010W RVB2Q12464 471 aaKnown RBP4.66□□□□□ -1.66
RET3YPL010W PHR1P05066 565 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
RET3YPL010W HSF1P10961 833 aa4.65□□□□□ -1.67
RET3YPL010W COQ1P18900 473 aa4.65□□□□□ -1.67
RET3YPL010W SHP1P34223 423 aa4.65□□□□□ -1.67
RET3YPL010W DBP7P36120 742 aaKnown RBP4.65□□□□□ -1.67
RET3YPL010W KTR3P38130 404 aaPredicted RBP4.65□□□□□ -1.67
RET3YPL010W REG2P38232 338 aa4.65□□□□□ -1.67
RET3YPL010W MSS4P38994 779 aa4.65□□□□□ -1.67
RET3YPL010W AZR1P50080 613 aa4.65□□□□□ -1.67
RET3YPL010W YGL039WP53183 348 aaKnown RBP4.65□□□□□ -1.67
RET3YPL010W VPS72Q03388 795 aa4.65□□□□□ -1.67
RET3YPL010W TMA64Q04600 565 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms