RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C YLR257WQ06146 321 aaKnown RBP8.53□□□□□ -1.04
LSP1YPL004C LEA1Q08963 238 aaPredicted RBP8.53□□□□□ -1.04
LSP1YPL004C GPM2Q12008 311 aa8.53□□□□□ -1.04
LSP1YPL004C TAF10Q12030 206 aa8.53□□□□□ -1.04
LSP1YPL004C CCH1P50077 2039 aa8.53□□□□□ -1.04
LSP1YPL004C RPS3P05750 240 aaKnown RBP8.52□□□□□ -1.05
LSP1YPL004C SNF1P06782 633 aaKnown RBP8.52□□□□□ -1.05
LSP1YPL004C PPR1P07272 904 aaPredicted RBP8.52□□□□□ -1.05
LSP1YPL004C SPE1P08432 466 aa8.52□□□□□ -1.05
LSP1YPL004C TRZ1P36159 838 aaPredicted RBP8.52□□□□□ -1.05
LSP1YPL004C PCM1P38628 557 aaKnown RBP8.52□□□□□ -1.05
LSP1YPL004C RTT107P38850 1070 aa8.52□□□□□ -1.05
LSP1YPL004C HXT8P40886 569 aa8.52□□□□□ -1.05
LSP1YPL004C PHO86P46956 311 aa8.52□□□□□ -1.05
LSP1YPL004C STR2P47164 639 aa8.52□□□□□ -1.05
LSP1YPL004C MND1P53102 219 aa8.52□□□□□ -1.05
LSP1YPL004C PUS2P53167 370 aa8.52□□□□□ -1.05
LSP1YPL004C SLG1P54867 378 aa8.52□□□□□ -1.05
LSP1YPL004C UME1Q03010 460 aa8.52□□□□□ -1.05
LSP1YPL004C TRE1Q08919 783 aa8.52□□□□□ -1.05
LSP1YPL004C HMI1Q12039 706 aa8.52□□□□□ -1.05
LSP1YPL004C SPE3Q12074 293 aaKnown RBP8.52□□□□□ -1.05
LSP1YPL004C TRP2P00899 507 aaKnown RBP8.51□□□□□ -1.05
LSP1YPL004C YER152CP10356 443 aa8.51□□□□□ -1.05
LSP1YPL004C PEX1P24004 1043 aa8.51□□□□□ -1.05
LSP1YPL004C SAT4P25333 603 aaKnown RBP8.51□□□□□ -1.05
LSP1YPL004C COQ8P27697 501 aa8.51□□□□□ -1.05
LSP1YPL004C MIC60P36112 540 aa8.51□□□□□ -1.05
LSP1YPL004C MOB1P40484 314 aa8.51□□□□□ -1.05
LSP1YPL004C NEW1Q08972 1196 aaKnown RBP8.51□□□□□ -1.05
LSP1YPL004C RRP6Q12149 733 aaKnown RBP8.51□□□□□ -1.05
LSP1YPL004C HRT3Q12347 344 aa8.51□□□□□ -1.05
LSP1YPL004C HMG2P12684 1045 aa8.5□□□□□ -1.05
LSP1YPL004C APE1P14904 514 aa8.5□□□□□ -1.05
LSP1YPL004C TSA1P34760 196 aaKnown RBP8.5□□□□□ -1.05
LSP1YPL004C BCH2P36122 765 aa8.5□□□□□ -1.05
LSP1YPL004C MAP2P38174 421 aaKnown RBP8.5□□□□□ -1.05
LSP1YPL004C SIF2P38262 535 aa8.5□□□□□ -1.05
LSP1YPL004C RIM4P38741 713 aa8.5□□□□□ -1.05
LSP1YPL004C PEX28P38848 579 aa8.5□□□□□ -1.05
LSP1YPL004C RAD55P38953 406 aa8.5□□□□□ -1.05
LSP1YPL004C SMC2P38989 1170 aaKnown RBP8.5□□□□□ -1.05
LSP1YPL004C YAP5P40574 245 aa8.5□□□□□ -1.05
LSP1YPL004C MMM1P41800 426 aa8.5□□□□□ -1.05
LSP1YPL004C TSR1Q07381 788 aaKnown RBP8.5□□□□□ -1.05
LSP1YPL004C ATG9Q12142 997 aa8.5□□□□□ -1.05
LSP1YPL004C YOL098CQ12496 1037 aa8.5□□□□□ -1.05
LSP1YPL004C PDC6P26263 563 aaKnown RBP8.49□□□□□ -1.05
LSP1YPL004C SPT5P27692 1063 aaKnown RBP8.49□□□□□ -1.05
LSP1YPL004C EXO5P38289 585 aa8.49□□□□□ -1.05
LSP1YPL004C SHQ1P40486 507 aaPredicted RBP8.49□□□□□ -1.05
LSP1YPL004C GPD1Q00055 391 aaKnown RBP8.49□□□□□ -1.05
LSP1YPL004C PRM6Q04705 352 aa8.49□□□□□ -1.05
LSP1YPL004C SPO12P17123 173 aa8.48□□□□□ -1.05
LSP1YPL004C MRP4P32902 394 aa8.48□□□□□ -1.05
LSP1YPL004C RDH54P38086 958 aa8.48□□□□□ -1.05
LSP1YPL004C YTA12P40341 825 aa8.48□□□□□ -1.05
LSP1YPL004C IES1P43579 692 aa8.48□□□□□ -1.05
LSP1YPL004C HOP2P53187 214 aa8.48□□□□□ -1.05
LSP1YPL004C YNR014WP53719 212 aa8.48□□□□□ -1.05
LSP1YPL004C CEG1Q01159 459 aaPredicted RBP8.48□□□□□ -1.05
LSP1YPL004C VPS54Q12071 889 aa8.48□□□□□ -1.05
LSP1YPL004C RRD2Q12461 358 aa8.48□□□□□ -1.05
LSP1YPL004C JIP3O13555 125 aa8.47□□□□□ -1.05
LSP1YPL004C CLC1P17891 233 aa8.47□□□□□ -1.05
LSP1YPL004C PDE1P22434 369 aa8.47□□□□□ -1.05
LSP1YPL004C LRE1P25579 583 aaKnown RBP8.47□□□□□ -1.05
LSP1YPL004C YKR051WP36142 418 aa8.47□□□□□ -1.05
LSP1YPL004C YBR056WP38081 501 aa8.47□□□□□ -1.05
LSP1YPL004C YBL036CP38197 257 aa8.47□□□□□ -1.05
LSP1YPL004C FHL1P39521 936 aa8.47□□□□□ -1.05
LSP1YPL004C LSB6P42951 607 aa8.47□□□□□ -1.05
LSP1YPL004C ERG5P54781 538 aa8.47□□□□□ -1.05
LSP1YPL004C YPL062WQ02781 134 aa8.47□□□□□ -1.05
LSP1YPL004C YDR344CQ05510 147 aa8.47□□□□□ -1.05
LSP1YPL004C DIS3Q08162 1001 aaKnown RBP8.47□□□□□ -1.05
LSP1YPL004C SGO1Q08490 590 aa8.47□□□□□ -1.05
LSP1YPL004C APC5Q08683 685 aa8.47□□□□□ -1.05
LSP1YPL004C RAD59Q12223 238 aa8.47□□□□□ -1.05
LSP1YPL004C BI2P03873 423 aa8.46□□□□□ -1.06
LSP1YPL004C BI4P03879 638 aa8.46□□□□□ -1.06
LSP1YPL004C EST1P17214 699 aaPredicted RBP8.46□□□□□ -1.06
LSP1YPL004C MCM2P29469 868 aa8.46□□□□□ -1.06
LSP1YPL004C ISF1P32488 338 aa8.46□□□□□ -1.06
LSP1YPL004C EBP2P36049 427 aaKnown RBP8.46□□□□□ -1.06
LSP1YPL004C JNM1P36224 373 aa8.46□□□□□ -1.06
LSP1YPL004C ABZ1P37254 787 aaPredicted RBP8.46□□□□□ -1.06
LSP1YPL004C BTT1P40314 149 aaPredicted RBP8.46□□□□□ -1.06
LSP1YPL004C PFD1P46988 109 aa8.46□□□□□ -1.06
LSP1YPL004C ASG7P46993 209 aa8.46□□□□□ -1.06
LSP1YPL004C HER2Q03557 464 aa8.46□□□□□ -1.06
LSP1YPL004C ARO80Q04052 950 aa8.46□□□□□ -1.06
LSP1YPL004C OPY2Q06810 360 aa8.46□□□□□ -1.06
LSP1YPL004C RCL1Q08096 367 aaPredicted RBP8.46□□□□□ -1.06
LSP1YPL004C NBP2Q12163 236 aa8.46□□□□□ -1.06
LSP1YPL004C BI3Q9ZZW7 517 aa8.46□□□□□ -1.06
LSP1YPL004C PEX34P25584 144 aa8.45□□□□□ -1.06
LSP1YPL004C DSS4P32601 143 aa8.45□□□□□ -1.06
LSP1YPL004C QNS1P38795 714 aaKnown RBP8.45□□□□□ -1.06
LSP1YPL004C SFB3P38810 929 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 109.6 ms