RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	DOT5	P40553	215 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	YNL193W	P53870	558 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	ARP5	P53946	755 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	PSK2	Q08217	1101 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	ETT1	Q08421	412 aa	Known RBP	4.09	□□□□□ -1.75
RIM11	YMR139W	RTT10	Q08924	1013 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	YPL150W	Q12152	901 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RIM11	YMR139W	YLL058W	Q12198	575 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	SUT2	Q12286	268 aa		4.09	□□□□□ -1.75
RIM11	YMR139W	SNU66	Q12420	587 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM11	YMR139W	ADR1	P07248	1323 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	INO1	P11986	533 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	OPI1	P21957	404 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	RDS1	P25611	832 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	PEP3	P27801	918 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	SEC20	P28791	383 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	SER1	P33330	395 aa	Known RBP	4.08	□□□□□ -1.76
RIM11	YMR139W	MPE1	P35728	441 aa	Known RBP	4.08	□□□□□ -1.76
RIM11	YMR139W	TDP1	P38319	544 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	YHL017W	P38745	532 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	LAM4	P38800	1345 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	POM152	P39685	1337 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	YGL176C	P46945	554 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	YKE2	P52553	114 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	SSL2	Q00578	843 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	YPL066W	Q12194	479 aa		4.08	□□□□□ -1.76
RIM11	YMR139W	MATALPHA2	P0CY08	210 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	HMLALPHA2	P0CY09	210 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	ATE1	P16639	503 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	MAL33	P38157	468 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	RIX1	P38883	763 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM11	YMR139W	YMR147W	P40218	223 aa	Known RBP	4.07	□□□□□ -1.76
RIM11	YMR139W	IMO32	P53219	342 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	SFB2	P53953	876 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	ESC2	Q06340	456 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	TMA46	Q12000	345 aa	Known RBP	4.07	□□□□□ -1.76
RIM11	YMR139W	DDP1	Q99321	188 aa	Known RBP	4.07	□□□□□ -1.76
RIM11	YMR139W	MYO1	P08964	1928 aa		4.07	□□□□□ -1.76
RIM11	YMR139W	TRP2	P00899	507 aa	Known RBP	4.06	□□□□□ -1.76
RIM11	YMR139W	PIF1	P07271	859 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	SES1	P07284	462 aa	Known RBP	4.06	□□□□□ -1.76
RIM11	YMR139W	GFA1	P14742	717 aa	Known RBP	4.06	□□□□□ -1.76
RIM11	YMR139W	IMP2'	P32351	346 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	LYP1	P32487	611 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	SLD2	P34252	453 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RIM11	YMR139W	BUD6	P41697	788 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	TIM50	Q02776	476 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	SPR28	Q04921	423 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	YLR407W	Q06070	228 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	RRP15	Q06511	250 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM11	YMR139W	FRE5	Q08908	694 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	NYV1	Q12255	253 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	RRI2	Q12348	645 aa		4.06	□□□□□ -1.76
RIM11	YMR139W	NOP58	Q12499	511 aa	Known RBP	4.06	□□□□□ -1.76
RIM11	YMR139W	GPA1	P08539	472 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	TUB1	P09733	447 aa	Known RBP	4.05	□□□□□ -1.76
RIM11	YMR139W	YKL107W	P34251	309 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	YER130C	P39959	443 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	EPL1	P43572	832 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	DAS1	P47005	663 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	ENP2	P48234	707 aa	Known RBP	4.05	□□□□□ -1.76
RIM11	YMR139W	YPT11	P48559	417 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	SLU7	Q02775	382 aa	Known RBP	4.05	□□□□□ -1.76
RIM11	YMR139W	COQ11	Q05892	277 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	ESF1	Q06344	628 aa	Known RBP	4.05	□□□□□ -1.76
RIM11	YMR139W	YPR196W	Q06595	470 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	SSF2	Q12153	453 aa	Predicted RBP	4.05	□□□□□ -1.76
RIM11	YMR139W	TAH18	Q12181	623 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	RKM4	Q12504	494 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	GSC2	P40989	1895 aa		4.05	□□□□□ -1.76
RIM11	YMR139W	PGI1	P12709	554 aa	Known RBP	4.04	□□□□□ -1.76
RIM11	YMR139W	STE14	P32584	239 aa		4.04	□□□□□ -1.76
RIM11	YMR139W	RFT1	P38206	574 aa	Predicted RBP	4.04	□□□□□ -1.76
RIM11	YMR139W	NPP2	P39997	493 aa		4.04	□□□□□ -1.76
RIM11	YMR139W	IRC8	P47046	822 aa		4.04	□□□□□ -1.76
RIM11	YMR139W	ERG5	P54781	538 aa		4.04	□□□□□ -1.76
RIM11	YMR139W	YNL162W-A	Q3E7A8	72 aa		4.04	□□□□□ -1.76
RIM11	YMR139W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
RIM11	YMR139W	CBP3	P21560	335 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	SRP40	P32583	406 aa	Predicted RBP	4.03	□□□□□ -1.76
RIM11	YMR139W	TMT1	P32643	299 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	MFT1	P33441	392 aa	Known RBP	4.03	□□□□□ -1.76
RIM11	YMR139W	YKT6	P36015	200 aa	Known RBP	4.03	□□□□□ -1.76
RIM11	YMR139W	CRG1	P38892	291 aa	RIP-Chip data	4.03	□□□□□ -1.76	not detected
RIM11	YMR139W	TPM2	P40414	161 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	FYV10	P40492	516 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	TYW3	P53177	273 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	VMS1	Q04311	632 aa	Known RBP	4.03	□□□□□ -1.76
RIM11	YMR139W	SPN1	Q06505	410 aa	Predicted RBP	4.03	□□□□□ -1.76
RIM11	YMR139W	THI3	Q07471	609 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	FLO1	P32768	1537 aa		4.03	□□□□□ -1.76
RIM11	YMR139W	HSP82	P02829	709 aa	Known RBP	4.02	□□□□□ -1.77
RIM11	YMR139W	HCA4	P20448	770 aa	Known RBP	4.02	□□□□□ -1.77
RIM11	YMR139W	GSY2	P27472	705 aa		4.02	□□□□□ -1.77
RIM11	YMR139W	HEM3	P28789	327 aa		4.02	□□□□□ -1.77
RIM11	YMR139W	MCM4	P30665	933 aa	Known RBP	4.02	□□□□□ -1.77
RIM11	YMR139W	MNR2	P35724	969 aa		4.02	□□□□□ -1.77
RIM11	YMR139W	MGE1	P38523	228 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms