RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C SPE1P08432 466 aa3.45□□□□□ -1.86
PRE8YML092C STE11P23561 717 aa3.45□□□□□ -1.86
PRE8YML092C EUG1P32474 517 aa3.45□□□□□ -1.86
PRE8YML092C YRO2P38079 344 aa3.45□□□□□ -1.86
PRE8YML092C KSP1P38691 1029 aaKnown RBP3.45□□□□□ -1.86
PRE8YML092C NOP2P40991 618 aaKnown RBP3.45□□□□□ -1.86
PRE8YML092C MET12P46151 657 aa3.45□□□□□ -1.86
PRE8YML092C CDA1Q06702 301 aa3.45□□□□□ -1.86
PRE8YML092C YDL124WQ07551 312 aaKnown RBP3.45□□□□□ -1.86
PRE8YML092C ADY3Q07732 790 aa3.45□□□□□ -1.86
PRE8YML092C ADE8P04161 214 aa3.44□□□□□ -1.86
PRE8YML092C PBY1P38254 753 aa3.44□□□□□ -1.86
PRE8YML092C TIF4631P39935 952 aaKnown RBP3.44□□□□□ -1.86
PRE8YML092C NPP2P39997 493 aa3.44□□□□□ -1.86
PRE8YML092C IRR1P40541 1150 aa3.44□□□□□ -1.86
PRE8YML092C PHO23P50947 330 aa3.44□□□□□ -1.86
PRE8YML092C YNL193WP53870 558 aa3.44□□□□□ -1.86
PRE8YML092C GSF2Q04697 403 aaKnown RBP3.44□□□□□ -1.86
PRE8YML092C RPN7Q06103 429 aaKnown RBP3.44□□□□□ -1.86
PRE8YML092C YDL144CQ07589 356 aa3.44□□□□□ -1.86
PRE8YML092C MET7Q08645 548 aa3.44□□□□□ -1.86
PRE8YML092C PRP9P19736 530 aaKnown RBP3.43□□□□□ -1.86
PRE8YML092C CAD1P24813 409 aaKnown RBP3.43□□□□□ -1.86
PRE8YML092C PER1P25625 357 aa3.43□□□□□ -1.86
PRE8YML092C TRM2P33753 639 aa3.43□□□□□ -1.86
PRE8YML092C GRX7P38068 203 aa3.43□□□□□ -1.86
PRE8YML092C YBR184WP38299 523 aa3.43□□□□□ -1.86
PRE8YML092C SPF1P39986 1215 aaKnown RBP3.43□□□□□ -1.86
PRE8YML092C GUS1P46655 708 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
PRE8YML092C YML037CQ03703 340 aa3.43□□□□□ -1.86
PRE8YML092C VMA2P16140 517 aaKnown RBP3.42□□□□□ -1.86
PRE8YML092C CDC48P25694 835 aaKnown RBP3.42□□□□□ -1.86
PRE8YML092C RGT1P32862 1170 aa3.42□□□□□ -1.86
PRE8YML092C STE5P32917 917 aa3.42□□□□□ -1.86
PRE8YML092C CST26P38226 397 aa3.42□□□□□ -1.86
PRE8YML092C SKP2P42843 763 aa3.42□□□□□ -1.86
PRE8YML092C ALR2P43553 858 aa3.42□□□□□ -1.86
PRE8YML092C IOC3P43596 787 aa3.42□□□□□ -1.86
PRE8YML092C PIP2P52960 996 aa3.42□□□□□ -1.86
PRE8YML092C SCS3P53012 380 aa3.42□□□□□ -1.86
PRE8YML092C RAI1P53063 387 aaKnown RBP3.42□□□□□ -1.86
PRE8YML092C VPS30Q02948 557 aa3.42□□□□□ -1.86
PRE8YML092C CSI1Q04368 295 aa3.42□□□□□ -1.86
PRE8YML092C WHI4Q07655 649 aaKnown RBP3.42□□□□□ -1.86
PRE8YML092C KEL3Q08979 651 aaPredicted RBP3.42□□□□□ -1.86
PRE8YML092C NPC2Q12408 173 aa3.42□□□□□ -1.86
PRE8YML092C PNS1Q12412 539 aa3.42□□□□□ -1.86
PRE8YML092C YDR524C-BQ3E6R4 66 aa3.42□□□□□ -1.86
PRE8YML092C NOT3P06102 836 aaKnown RBP3.41□□□□□ -1.86
PRE8YML092C RFA1P22336 621 aaKnown RBP3.41□□□□□ -1.86
PRE8YML092C NPP1P25353 742 aa3.41□□□□□ -1.86
PRE8YML092C RPC82P32349 654 aa3.41□□□□□ -1.86
PRE8YML092C CDC11P32458 415 aa3.41□□□□□ -1.86
PRE8YML092C ATG19P35193 415 aa3.41□□□□□ -1.86
PRE8YML092C YBR284WP38150 797 aa3.41□□□□□ -1.86
PRE8YML092C TSL1P38427 1098 aaKnown RBP3.41□□□□□ -1.86
PRE8YML092C NOC2P39744 710 aaKnown RBP3.41□□□□□ -1.86
PRE8YML092C MSE1P48525 536 aa3.41□□□□□ -1.86
PRE8YML092C BUL2Q03758 920 aaKnown RBP3.41□□□□□ -1.86
PRE8YML092C SPO75Q07798 868 aa3.41□□□□□ -1.86
PRE8YML092C NTO1Q12311 748 aa3.41□□□□□ -1.86
PRE8YML092C RRI2Q12348 645 aa3.41□□□□□ -1.86
PRE8YML092C CYB2P00175 591 aa3.4□□□□□ -1.87
PRE8YML092C PIF1P07271 859 aa3.4□□□□□ -1.87
PRE8YML092C HEM1P09950 548 aaPredicted RBP3.4□□□□□ -1.87
PRE8YML092C PFK1P16861 987 aaKnown RBP3.4□□□□□ -1.87
PRE8YML092C SUI2P20459 304 aaKnown RBP3.4□□□□□ -1.87
PRE8YML092C PRE8P23639 250 aa3.4□□□□□ -1.87
PRE8YML092C SED4P25365 1065 aa3.4□□□□□ -1.87
PRE8YML092C ARE1P25628 610 aa3.4□□□□□ -1.87
PRE8YML092C YUR1P26725 428 aa3.4□□□□□ -1.87
PRE8YML092C SRP40P32583 406 aaPredicted RBP3.4□□□□□ -1.87
PRE8YML092C UTR4P32626 227 aa3.4□□□□□ -1.87
PRE8YML092C YKR078WP36158 585 aaKnown RBP3.4□□□□□ -1.87
PRE8YML092C CHA4P43634 648 aa3.4□□□□□ -1.87
PRE8YML092C SUN4P53616 420 aa3.4□□□□□ -1.87
PRE8YML092C NAN1Q02931 896 aaKnown RBP3.4□□□□□ -1.87
PRE8YML092C EAF1Q06337 982 aa3.4□□□□□ -1.87
PRE8YML092C AIM39Q08223 395 aa3.4□□□□□ -1.87
PRE8YML092C SSF2Q12153 453 aaPredicted RBP3.4□□□□□ -1.87
PRE8YML092C YPR071WQ12346 211 aa3.4□□□□□ -1.87
PRE8YML092C OSH2Q12451 1283 aa3.4□□□□□ -1.87
PRE8YML092C KCS1Q12494 1050 aa3.4□□□□□ -1.87
PRE8YML092C RPS19AP07280 144 aaKnown RBP3.39□□□□□ -1.87
PRE8YML092C RPS19BP07281 144 aaPredicted RBP3.39□□□□□ -1.87
PRE8YML092C PMI40P29952 429 aaKnown RBP3.39□□□□□ -1.87
PRE8YML092C KTR3P38130 404 aaPredicted RBP3.39□□□□□ -1.87
PRE8YML092C CEP3P40969 608 aa3.39□□□□□ -1.87
PRE8YML092C CCM1P48237 864 aaPredicted RBP3.39□□□□□ -1.87
PRE8YML092C YGL039WP53183 348 aaKnown RBP3.39□□□□□ -1.87
PRE8YML092C PUS9Q12069 462 aa3.39□□□□□ -1.87
PRE8YML092C DAP1Q12091 152 aa3.39□□□□□ -1.87
PRE8YML092C RAD18P10862 487 aa3.38□□□□□ -1.87
PRE8YML092C CHS3P29465 1165 aa3.38□□□□□ -1.87
PRE8YML092C DCG1P32460 244 aa3.38□□□□□ -1.87
PRE8YML092C SHP1P34223 423 aa3.38□□□□□ -1.87
PRE8YML092C DBP7P36120 742 aaKnown RBP3.38□□□□□ -1.87
PRE8YML092C TOM71P38825 639 aaKnown RBP3.38□□□□□ -1.87
PRE8YML092C JHD1P40034 492 aa3.38□□□□□ -1.87
PRE8YML092C RSC8P43609 557 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms