RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W SWM1Q12379 170 aa6.3□□□□□ -1.4
CTR3YLR411W SIR4P11978 1358 aa6.3□□□□□ -1.4
CTR3YLR411W SRD1P09007 221 aa6.29□□□□□ -1.4
CTR3YLR411W PRP4P20053 465 aaKnown RBP6.29□□□□□ -1.4
CTR3YLR411W ZIP2P53061 704 aa6.29□□□□□ -1.4
CTR3YLR411W ASI2P53895 289 aa6.29□□□□□ -1.4
CTR3YLR411W SNP1Q00916 300 aaPredicted RBP6.29□□□□□ -1.4
CTR3YLR411W YDR338CQ05497 695 aa6.29□□□□□ -1.4
CTR3YLR411W KRE5P22023 1365 aa6.29□□□□□ -1.4
CTR3YLR411W MNN1P39106 762 aa6.28□□□□□ -1.4
CTR3YLR411W VHR1P40522 640 aa6.28□□□□□ -1.4
CTR3YLR411W YFR016CP43597 1233 aaKnown RBP6.28□□□□□ -1.4
CTR3YLR411W PSK1P31374 1356 aa6.28□□□□□ -1.4
CTR3YLR411W RAD9P14737 1309 aa6.27□□□□□ -1.41
CTR3YLR411W TYS1P36421 394 aaKnown RBP6.27□□□□□ -1.41
CTR3YLR411W SAK1P38990 1142 aa6.27□□□□□ -1.41
CTR3YLR411W PZF1P39933 429 aa6.27□□□□□ -1.41
CTR3YLR411W MPP10P47083 593 aaKnown RBP6.27□□□□□ -1.41
CTR3YLR411W ERG5P54781 538 aa6.27□□□□□ -1.41
CTR3YLR411W MUS81Q04149 632 aaPredicted RBP6.27□□□□□ -1.41
CTR3YLR411W CRR1Q05790 422 aa6.27□□□□□ -1.41
CTR3YLR411W TRM11Q12463 433 aa6.27□□□□□ -1.41
CTR3YLR411W NOP14Q99207 810 aaKnown RBP6.27□□□□□ -1.41
CTR3YLR411W GRX4P32642 244 aa6.26□□□□□ -1.41
CTR3YLR411W TRM2P33753 639 aa6.26□□□□□ -1.41
CTR3YLR411W CTF13P35203 478 aa6.26□□□□□ -1.41
CTR3YLR411W DEF1P35732 738 aaKnown RBP6.26□□□□□ -1.41
CTR3YLR411W RTR1P40084 226 aaPredicted RBP6.26□□□□□ -1.41
CTR3YLR411W BUL1P48524 976 aa6.26□□□□□ -1.41
CTR3YLR411W TFB2Q02939 513 aa6.26□□□□□ -1.41
CTR3YLR411W RAD18P10862 487 aa6.25□□□□□ -1.41
CTR3YLR411W HOG1P32485 435 aa6.25□□□□□ -1.41
CTR3YLR411W YEL1P34225 687 aa6.25□□□□□ -1.41
CTR3YLR411W EBP2P36049 427 aaKnown RBP6.25□□□□□ -1.41
CTR3YLR411W RPN10P38886 268 aaKnown RBP6.25□□□□□ -1.41
CTR3YLR411W FUN12P39730 1002 aaKnown RBP6.25□□□□□ -1.41
CTR3YLR411W PFA3P42836 336 aa6.25□□□□□ -1.41
CTR3YLR411W YLR001CQ07895 862 aa6.25□□□□□ -1.41
CTR3YLR411W GPR1Q12361 961 aa6.25□□□□□ -1.41
CTR3YLR411W TRP4P07285 380 aaPredicted RBP6.24□□□□□ -1.41
CTR3YLR411W MIH1P23748 554 aa6.24□□□□□ -1.41
CTR3YLR411W ROX1P25042 368 aa6.24□□□□□ -1.41
CTR3YLR411W PRD1P25375 712 aa6.24□□□□□ -1.41
CTR3YLR411W PCL2P25693 308 aa6.24□□□□□ -1.41
CTR3YLR411W PMI40P29952 429 aaKnown RBP6.24□□□□□ -1.41
CTR3YLR411W YIL092WP40497 633 aa6.24□□□□□ -1.41
CTR3YLR411W RRP46P53256 223 aaPredicted RBP6.24□□□□□ -1.41
CTR3YLR411W PKH1Q03407 766 aa6.24□□□□□ -1.41
CTR3YLR411W ECM16Q04217 1267 aaKnown RBP6.24□□□□□ -1.41
CTR3YLR411W LSP1Q12230 341 aaKnown RBP6.24□□□□□ -1.41
CTR3YLR411W SNF2P22082 1703 aa6.24□□□□□ -1.41
CTR3YLR411W MLP1Q02455 1875 aaKnown RBP6.24□□□□□ -1.41
CTR3YLR411W RPL8AP17076 256 aaKnown RBP6.23□□□□□ -1.41
CTR3YLR411W RPP1P38786 293 aa6.23□□□□□ -1.41
CTR3YLR411W YNL193WP53870 558 aa6.23□□□□□ -1.41
CTR3YLR411W NHX1Q04121 633 aa6.23□□□□□ -1.41
CTR3YLR411W UTP14Q04500 899 aaKnown RBP6.23□□□□□ -1.41
CTR3YLR411W COG8Q04632 607 aa6.23□□□□□ -1.41
CTR3YLR411W ASM4Q05166 528 aa6.23□□□□□ -1.41
CTR3YLR411W YLR149CQ99296 730 aa6.23□□□□□ -1.41
CTR3YLR411W AIM44Q99299 758 aa6.23□□□□□ -1.41
CTR3YLR411W YLR415CO13578 112 aa6.22□□□□□ -1.41
CTR3YLR411W TUB2P02557 457 aaKnown RBP6.22□□□□□ -1.41
CTR3YLR411W HRR25P29295 494 aaKnown RBP6.22□□□□□ -1.41
CTR3YLR411W NGG1P32494 702 aa6.22□□□□□ -1.41
CTR3YLR411W BNA2P47125 453 aa6.22□□□□□ -1.41
CTR3YLR411W MTR3P48240 250 aaPredicted RBP6.22□□□□□ -1.41
CTR3YLR411W MRPS35P53292 345 aa6.22□□□□□ -1.41
CTR3YLR411W HEF3P53978 1044 aaKnown RBP6.22□□□□□ -1.41
CTR3YLR411W AIM39Q08223 395 aa6.22□□□□□ -1.41
CTR3YLR411W PCT1P13259 424 aa6.21□□□□□ -1.42
CTR3YLR411W EFT1P32324 842 aaKnown RBP6.21□□□□□ -1.42
CTR3YLR411W MNN4P36044 1178 aa6.21□□□□□ -1.42
CTR3YLR411W VPS24P36095 224 aaKnown RBP6.21□□□□□ -1.42
CTR3YLR411W HSL7P38274 827 aa6.21□□□□□ -1.42
CTR3YLR411W YFL052WP43551 465 aa6.21□□□□□ -1.42
CTR3YLR411W NPY1P53164 384 aa6.21□□□□□ -1.42
CTR3YLR411W DNM1P54861 757 aa6.21□□□□□ -1.42
CTR3YLR411W THI22Q06490 572 aa6.21□□□□□ -1.42
CTR3YLR411W Q0142Q9ZZW4 58 aa6.21□□□□□ -1.42
CTR3YLR411W LEU2P04173 364 aaPredicted RBP6.2□□□□□ -1.42
CTR3YLR411W SFL1P20134 766 aa6.2□□□□□ -1.42
CTR3YLR411W TCB2P48231 1178 aa6.2□□□□□ -1.42
CTR3YLR411W DOS2P54858 310 aa6.2□□□□□ -1.42
CTR3YLR411W GSF2Q04697 403 aaKnown RBP6.2□□□□□ -1.42
CTR3YLR411W ATG33Q06485 197 aa6.2□□□□□ -1.42
CTR3YLR411W EDE1P34216 1381 aa6.19□□□□□ -1.42
CTR3YLR411W SFP1P32432 683 aa6.19□□□□□ -1.42
CTR3YLR411W YKR051WP36142 418 aa6.19□□□□□ -1.42
CTR3YLR411W PCM1P38628 557 aaKnown RBP6.19□□□□□ -1.42
CTR3YLR411W SIC1P38634 284 aa6.19□□□□□ -1.42
CTR3YLR411W FKH2P41813 862 aa6.19□□□□□ -1.42
CTR3YLR411W SUN4P53616 420 aa6.19□□□□□ -1.42
CTR3YLR411W KIN4Q01919 800 aa6.19□□□□□ -1.42
CTR3YLR411W PUS9Q12069 462 aa6.19□□□□□ -1.42
CTR3YLR411W DNF3Q12674 1656 aa6.18□□□□□ -1.42
CTR3YLR411W HMG1P12683 1054 aa6.18□□□□□ -1.42
CTR3YLR411W ERG4P25340 473 aa6.18□□□□□ -1.42
CTR3YLR411W KTR4P38131 464 aa6.18□□□□□ -1.42
CTR3YLR411W AIM21P40563 679 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms