RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W PDC6P26263 563 aaKnown RBP4.89□□□□□ -1.63
CBF5YLR175W HXT1P32465 570 aa4.89□□□□□ -1.63
CBF5YLR175W SWI3P32591 825 aa4.89□□□□□ -1.63
CBF5YLR175W BCK2P33306 851 aa4.89□□□□□ -1.63
CBF5YLR175W NIP100P33420 868 aa4.89□□□□□ -1.63
CBF5YLR175W PCH2P38126 564 aa4.89□□□□□ -1.63
CBF5YLR175W QDR1P40475 563 aa4.89□□□□□ -1.63
CBF5YLR175W SAD1P43589 448 aa4.89□□□□□ -1.63
CBF5YLR175W TAD1P53065 400 aa4.89□□□□□ -1.63
CBF5YLR175W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63 RIP-Chip
CBF5YLR175W MUK1Q02866 612 aa4.89□□□□□ -1.63
CBF5YLR175W HED1Q03937 162 aa4.89□□□□□ -1.63
CBF5YLR175W DOT1Q04089 582 aaKnown RBP4.89□□□□□ -1.63
CBF5YLR175W OPY2Q06810 360 aa4.89□□□□□ -1.63
CBF5YLR175W IWR1Q07532 353 aaPredicted RBP4.89□□□□□ -1.63
CBF5YLR175W SLX4Q12098 748 aa4.89□□□□□ -1.63
CBF5YLR175W WTM2Q12206 467 aa4.89□□□□□ -1.63
CBF5YLR175W TAO3P40468 2376 aa4.89□□□□□ -1.63
CBF5YLR175W SNF1P06782 633 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W MTF2P10849 440 aa4.88□□□□□ -1.63
CBF5YLR175W CDC42P19073 191 aa4.88□□□□□ -1.63
CBF5YLR175W COX11P19516 300 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W FUB1P25659 250 aa4.88□□□□□ -1.63
CBF5YLR175W SMC1P32908 1225 aa4.88□□□□□ -1.63
CBF5YLR175W XRS2P33301 854 aa4.88□□□□□ -1.63
CBF5YLR175W MNR2P35724 969 aa4.88□□□□□ -1.63
CBF5YLR175W POA1P38218 177 aa4.88□□□□□ -1.63
CBF5YLR175W MCX1P38323 520 aaPredicted RBP4.88□□□□□ -1.63
CBF5YLR175W PPX1P38698 397 aa4.88□□□□□ -1.63
CBF5YLR175W EFM4P40516 257 aa4.88□□□□□ -1.63
CBF5YLR175W IES1P43579 692 aa4.88□□□□□ -1.63
CBF5YLR175W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
CBF5YLR175W YNL134CP53912 376 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W VPS72Q03388 795 aa4.88□□□□□ -1.63
CBF5YLR175W PPM1Q04081 328 aa4.88□□□□□ -1.63
CBF5YLR175W DFG5Q05031 458 aa4.88□□□□□ -1.63
CBF5YLR175W BDS1Q08347 646 aa4.88□□□□□ -1.63
CBF5YLR175W DAS2Q12084 232 aa4.88□□□□□ -1.63
CBF5YLR175W PCD1Q12524 340 aa4.88□□□□□ -1.63
CBF5YLR175W TRP2P00899 507 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W RPS3P05750 240 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W ASP3-2P0CX77 362 aa4.88□□□□□ -1.63
CBF5YLR175W ASP3-3P0CX78 362 aa4.88□□□□□ -1.63
CBF5YLR175W ASP3-4P0CX79 362 aa4.88□□□□□ -1.63
CBF5YLR175W ASP3-1P0CZ17 362 aa4.88□□□□□ -1.63
CBF5YLR175W SEC21P32074 935 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W MFT1P33441 392 aaKnown RBP4.88□□□□□ -1.63
CBF5YLR175W TRM2P33753 639 aa4.88□□□□□ -1.63
CBF5YLR175W TVP23P38962 199 aa4.88□□□□□ -1.63
CBF5YLR175W CAJ1P39101 391 aa4.88□□□□□ -1.63
CBF5YLR175W YFL040WP43562 540 aa4.88□□□□□ -1.63
CBF5YLR175W CPR7P47103 393 aa4.88□□□□□ -1.63
CBF5YLR175W YGR021WP53212 290 aa4.88□□□□□ -1.63
CBF5YLR175W YPL034WQ03083 165 aa4.88□□□□□ -1.63
CBF5YLR175W SHS1Q07657 551 aa4.88□□□□□ -1.63
CBF5YLR175W ZPS1Q12512 249 aa4.88□□□□□ -1.63
CBF5YLR175W YDR524C-BQ3E6R4 66 aa4.88□□□□□ -1.63
CBF5YLR175W TOM70P07213 617 aaKnown RBP4.87□□□□□ -1.63
CBF5YLR175W CDC33P07260 213 aaKnown RBP4.87□□□□□ -1.63
CBF5YLR175W AMS1P22855 1083 aa4.87□□□□□ -1.63
CBF5YLR175W RAD57P25301 460 aa4.87□□□□□ -1.63
CBF5YLR175W RRP43P25359 394 aaPredicted RBP4.87□□□□□ -1.63
CBF5YLR175W POT1P27796 417 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63 RIP-Chip
CBF5YLR175W CYS3P31373 394 aaKnown RBP4.87□□□□□ -1.63
CBF5YLR175W STO1P34160 861 aaKnown RBP4.87□□□□□ -1.63
CBF5YLR175W CSG2P35206 410 aa4.87□□□□□ -1.63
CBF5YLR175W TRZ1P36159 838 aaPredicted RBP4.87□□□□□ -1.63
CBF5YLR175W YBR197CP38306 217 aa4.87□□□□□ -1.63
CBF5YLR175W YHL026CP38740 315 aa4.87□□□□□ -1.63
CBF5YLR175W YHR054CP38780 354 aa4.87□□□□□ -1.63
CBF5YLR175W XDJ1P39102 459 aa4.87□□□□□ -1.63
CBF5YLR175W YER186CP40101 306 aa4.87□□□□□ -1.63
CBF5YLR175W MMM1P41800 426 aa4.87□□□□□ -1.63
CBF5YLR175W LAM5P43560 674 aa4.87□□□□□ -1.63
CBF5YLR175W CLA4P48562 842 aa4.87□□□□□ -1.63
CBF5YLR175W YGR035CP53222 116 aa4.87□□□□□ -1.63
CBF5YLR175W BOP3P53958 396 aa4.87□□□□□ -1.63
CBF5YLR175W ERV41Q04651 352 aa4.87□□□□□ -1.63
CBF5YLR175W AI5_BETAQ9ZZX0 354 aa4.87□□□□□ -1.63
CBF5YLR175W LAA1P39526 2014 aa4.86□□□□□ -1.63
CBF5YLR175W PET111P08468 800 aa4.86□□□□□ -1.63
CBF5YLR175W RPL4AP10664 362 aaKnown RBP4.86□□□□□ -1.63
CBF5YLR175W CKI1P20485 582 aa4.86□□□□□ -1.63
CBF5YLR175W IME1P21190 360 aa4.86□□□□□ -1.63
CBF5YLR175W PRR1P28708 518 aa4.86□□□□□ -1.63
CBF5YLR175W SRB4P32569 687 aa4.86□□□□□ -1.63
CBF5YLR175W JNM1P36224 373 aa4.86□□□□□ -1.63
CBF5YLR175W DYS1P38791 387 aa4.86□□□□□ -1.63
CBF5YLR175W KAP123P40069 1113 aaKnown RBP4.86□□□□□ -1.63
CBF5YLR175W OSW7P43611 510 aa4.86□□□□□ -1.63
CBF5YLR175W SGM1P47166 707 aa4.86□□□□□ -1.63
CBF5YLR175W GCV2P49095 1034 aa4.86□□□□□ -1.63
CBF5YLR175W APT1P49435 187 aaKnown RBP4.86□□□□□ -1.63
CBF5YLR175W RPL4BP49626 362 aaKnown RBP4.86□□□□□ -1.63
CBF5YLR175W ALT2P52892 507 aa4.86□□□□□ -1.63
CBF5YLR175W TPO2P53283 614 aa4.86□□□□□ -1.63
CBF5YLR175W BTN2P53286 410 aa4.86□□□□□ -1.63
CBF5YLR175W ALG11P53954 548 aaKnown RBP4.86□□□□□ -1.63
CBF5YLR175W NGL3Q03210 505 aa4.86□□□□□ -1.63
CBF5YLR175W PUS1Q12211 544 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms