RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C APN2P38207 520 aa5.55□□□□□ -1.52
RPF2YKR081C CBR1P38626 284 aaKnown RBP5.55□□□□□ -1.52
RPF2YKR081C SSZ1P38788 538 aaKnown RBP5.55□□□□□ -1.52
RPF2YKR081C SET2P46995 733 aaKnown RBP5.55□□□□□ -1.52
RPF2YKR081C PAN2P53010 1115 aaPredicted RBP5.55□□□□□ -1.52
RPF2YKR081C MET13P53128 600 aa5.55□□□□□ -1.52
RPF2YKR081C SMX3P54999 86 aaPredicted RBP5.55□□□□□ -1.52
RPF2YKR081C GUD1Q07729 489 aa5.55□□□□□ -1.52
RPF2YKR081C RPL8AP17076 256 aaKnown RBP5.54□□□□□ -1.52
RPF2YKR081C CDC43P18898 376 aa5.54□□□□□ -1.52
RPF2YKR081C YJR039WP47107 1121 aa5.54□□□□□ -1.52
RPF2YKR081C BRE5P53741 515 aaKnown RBP5.54□□□□□ -1.52
RPF2YKR081C LEE1Q02799 301 aaKnown RBP5.54□□□□□ -1.52
RPF2YKR081C SFB3P38810 929 aa5.53□□□□□ -1.52
RPF2YKR081C GET2P40056 285 aa5.53□□□□□ -1.52
RPF2YKR081C MGS1P40151 587 aa5.53□□□□□ -1.52
RPF2YKR081C COX18P53239 316 aa5.53□□□□□ -1.52
RPF2YKR081C SDA1P53313 767 aaKnown RBP5.53□□□□□ -1.52
RPF2YKR081C GPD1Q00055 391 aaKnown RBP5.53□□□□□ -1.52
RPF2YKR081C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
RPF2YKR081C CLF1Q12309 687 aaPredicted RBP5.53□□□□□ -1.52
RPF2YKR081C GFA1P14742 717 aaKnown RBP5.52□□□□□ -1.53
RPF2YKR081C PEX1P24004 1043 aa5.52□□□□□ -1.53
RPF2YKR081C NOP9P47077 666 aaKnown RBP5.52□□□□□ -1.53
RPF2YKR081C DCS2Q12123 353 aa5.52□□□□□ -1.53
RPF2YKR081C KIN3P22209 435 aa5.51□□□□□ -1.53
RPF2YKR081C PPZ2P33329 710 aa5.51□□□□□ -1.53
RPF2YKR081C AKL1P38080 1108 aaKnown RBP5.51□□□□□ -1.53
RPF2YKR081C MAL31P38156 614 aa5.51□□□□□ -1.53
RPF2YKR081C TDP1P38319 544 aa5.51□□□□□ -1.53
RPF2YKR081C CRP1P38845 465 aaKnown RBP5.51□□□□□ -1.53
RPF2YKR081C HRB1P38922 454 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
RPF2YKR081C NDC80P40460 691 aa5.51□□□□□ -1.53
RPF2YKR081C FHN1P53279 174 aa5.51□□□□□ -1.53
RPF2YKR081C DIA2Q08496 732 aaPredicted RBP5.51□□□□□ -1.53
RPF2YKR081C PHO11P35842 467 aa5.5□□□□□ -1.53
RPF2YKR081C PHO12P38693 467 aa5.5□□□□□ -1.53
RPF2YKR081C ARG2P40360 574 aa5.5□□□□□ -1.53
RPF2YKR081C RSC8P43609 557 aaKnown RBP5.5□□□□□ -1.53
RPF2YKR081C NDJ1Q12366 352 aa5.5□□□□□ -1.53
RPF2YKR081C ZRT2Q12436 422 aa5.5□□□□□ -1.53
RPF2YKR081C ECM3Q99252 613 aa5.5□□□□□ -1.53
RPF2YKR081C HCA4P20448 770 aaKnown RBP5.49□□□□□ -1.53
RPF2YKR081C DMC1P25453 334 aa5.49□□□□□ -1.53
RPF2YKR081C YHR202WP38887 602 aa5.49□□□□□ -1.53
RPF2YKR081C VPS73P53142 486 aaKnown RBP5.49□□□□□ -1.53
RPF2YKR081C DNM1P54861 757 aa5.49□□□□□ -1.53
RPF2YKR081C RGC1Q06108 1083 aaKnown RBP5.49□□□□□ -1.53
RPF2YKR081C THI22Q06490 572 aa5.49□□□□□ -1.53
RPF2YKR081C ADR1P07248 1323 aa5.48□□□□□ -1.53
RPF2YKR081C YKR075CP36155 307 aa5.48□□□□□ -1.53
RPF2YKR081C YJL206CP39529 758 aa5.48□□□□□ -1.53
RPF2YKR081C YNL195CP40168 261 aa5.48□□□□□ -1.53
RPF2YKR081C SNM1P40993 198 aa5.48□□□□□ -1.53
RPF2YKR081C HLJ1P48353 224 aa5.48□□□□□ -1.53
RPF2YKR081C ATG4P53867 494 aa5.48□□□□□ -1.53
RPF2YKR081C ISA1Q07821 250 aaPredicted RBP5.48□□□□□ -1.53
RPF2YKR081C BIT2P38346 545 aa5.47□□□□□ -1.53
RPF2YKR081C BEM4P39011 633 aa5.47□□□□□ -1.53
RPF2YKR081C NUG1P40010 520 aaKnown RBP5.47□□□□□ -1.53
RPF2YKR081C PIG2P40187 538 aa5.47□□□□□ -1.53
RPF2YKR081C CCT7P42943 550 aaKnown RBP5.47□□□□□ -1.53
RPF2YKR081C RET2P43621 546 aa5.47□□□□□ -1.53
RPF2YKR081C BFA1P47113 574 aa5.47□□□□□ -1.53
RPF2YKR081C CTR1P49573 406 aa5.47□□□□□ -1.53
RPF2YKR081C MLH3Q12083 715 aa5.47□□□□□ -1.53
RPF2YKR081C TAF3Q12297 353 aa5.47□□□□□ -1.53
RPF2YKR081C ERG20P08524 352 aaKnown RBP5.46□□□□□ -1.54
RPF2YKR081C THR1P17423 357 aaKnown RBP5.46□□□□□ -1.54
RPF2YKR081C GLG1P36143 616 aa5.46□□□□□ -1.54
RPF2YKR081C TDA3P38758 523 aa5.46□□□□□ -1.54
RPF2YKR081C FPR3P38911 411 aaKnown RBP5.46□□□□□ -1.54
RPF2YKR081C CKB2P38930 258 aa5.46□□□□□ -1.54
RPF2YKR081C BDH2P39713 417 aa5.46□□□□□ -1.54
RPF2YKR081C TAH11P47112 604 aa5.46□□□□□ -1.54
RPF2YKR081C PRP28P23394 588 aa5.45□□□□□ -1.54
RPF2YKR081C PET127P32606 800 aa5.45□□□□□ -1.54
RPF2YKR081C BCS1P32839 456 aa5.45□□□□□ -1.54
RPF2YKR081C SEC6P32844 805 aa5.45□□□□□ -1.54
RPF2YKR081C YJR096WP47137 282 aa5.45□□□□□ -1.54
RPF2YKR081C VHS3Q08438 674 aa5.45□□□□□ -1.54
RPF2YKR081C USV1Q12132 391 aa5.45□□□□□ -1.54
RPF2YKR081C SUT2Q12286 268 aa5.45□□□□□ -1.54
RPF2YKR081C IMG2P25642 146 aaPredicted RBP5.44□□□□□ -1.54
RPF2YKR081C YIL166CP40445 542 aa5.44□□□□□ -1.54
RPF2YKR081C THI73Q07904 523 aa5.44□□□□□ -1.54
RPF2YKR081C CHS5Q12114 671 aaKnown RBP5.44□□□□□ -1.54
RPF2YKR081C POM34Q12445 299 aa5.44□□□□□ -1.54
RPF2YKR081C FRS1P15624 595 aaKnown RBP5.43□□□□□ -1.54
RPF2YKR081C PRP19P32523 503 aaKnown RBP5.43□□□□□ -1.54
RPF2YKR081C UBS1P38290 277 aa5.43□□□□□ -1.54
RPF2YKR081C RIX1P38883 763 aaPredicted RBP5.43□□□□□ -1.54
RPF2YKR081C YMR210WQ03649 449 aa5.43□□□□□ -1.54
RPF2YKR081C VPS36Q06696 566 aa5.43□□□□□ -1.54
RPF2YKR081C YGR161W-CQ3E744 92 aa5.43□□□□□ -1.54
RPF2YKR081C BNR1P40450 1375 aa5.42□□□□□ -1.54
RPF2YKR081C ABF1P14164 731 aa5.42□□□□□ -1.54
RPF2YKR081C KIN82P25341 720 aa5.42□□□□□ -1.54
RPF2YKR081C FEN2P25621 512 aaKnown RBP5.42□□□□□ -1.54
RPF2YKR081C YPT7P32939 208 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 126.8 ms