RNA–Protein interactions for RNA: YJL080C

SCP160, Transcript of Essential RNA-binding G protein effector of mating response pathway, yeast

Gene SCP160, Length 3,669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCP160	YJL080C	VTC2	P43585	828 aa		2.59	□□□□□ -2
SCP160	YJL080C	ENT3	P47160	408 aa		2.59	□□□□□ -2
SCP160	YJL080C	ALG11	P53954	548 aa	Known RBP	2.59	□□□□□ -2
SCP160	YJL080C	DOS2	P54858	310 aa		2.59	□□□□□ -2
SCP160	YJL080C	SPE3	Q12074	293 aa	Known RBP	2.59	□□□□□ -2
SCP160	YJL080C	TRS33	Q99394	268 aa		2.59	□□□□□ -2
SCP160	YJL080C	TOM70	P07213	617 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	APE1	P14904	514 aa		2.58	□□□□□ -2
SCP160	YJL080C	RPC31	P17890	251 aa		2.58	□□□□□ -2
SCP160	YJL080C	IMG2	P25642	146 aa	Predicted RBP	2.58	□□□□□ -2
SCP160	YJL080C	BLI1	P35727	113 aa		2.58	□□□□□ -2
SCP160	YJL080C	UBP13	P38187	747 aa		2.58	□□□□□ -2
SCP160	YJL080C	PEX28	P38848	579 aa		2.58	□□□□□ -2
SCP160	YJL080C	NPP2	P39997	493 aa		2.58	□□□□□ -2
SCP160	YJL080C	ASN1	P49089	572 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	RCR2	Q03446	210 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	VPS20	Q04272	221 aa		2.58	□□□□□ -2
SCP160	YJL080C	YDL057W	Q07379	328 aa		2.58	□□□□□ -2
SCP160	YJL080C	ESC8	Q08119	714 aa		2.58	□□□□□ -2
SCP160	YJL080C	SGO1	Q08490	590 aa		2.58	□□□□□ -2
SCP160	YJL080C	PKH2	Q12236	1081 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	OSH2	Q12451	1283 aa		2.58	□□□□□ -2
SCP160	YJL080C	RPP2B	P02400	110 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	RPL22A	P05749	121 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	SNF1	P06782	633 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	RGP1	P16664	663 aa		2.58	□□□□□ -2
SCP160	YJL080C	RPB10	P22139	70 aa		2.58	□□□□□ -2
SCP160	YJL080C	PGS1	P25578	521 aa		2.58	□□□□□ -2
SCP160	YJL080C	YHR054C	P38780	354 aa		2.58	□□□□□ -2
SCP160	YJL080C	ERP5	P38819	212 aa		2.58	□□□□□ -2
SCP160	YJL080C	YIR016W	P40572	265 aa		2.58	□□□□□ -2
SCP160	YJL080C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
SCP160	YJL080C	ADA2	Q02336	434 aa		2.58	□□□□□ -2
SCP160	YJL080C	COG8	Q04632	607 aa		2.58	□□□□□ -2
SCP160	YJL080C	HCR1	Q05775	265 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	PLP2	Q12017	286 aa		2.58	□□□□□ -2
SCP160	YJL080C	RPS9A	O13516	197 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	HMG2	P12684	1045 aa		2.58	□□□□□ -2
SCP160	YJL080C	STE6	P12866	1290 aa		2.58	□□□□□ -2
SCP160	YJL080C	RAD27	P26793	382 aa		2.58	□□□□□ -2
SCP160	YJL080C	HIR1	P32479	840 aa		2.58	□□□□□ -2
SCP160	YJL080C	MRT4	P33201	236 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	GCS1	P35197	352 aa		2.58	□□□□□ -2
SCP160	YJL080C	YBR284W	P38150	797 aa		2.58	□□□□□ -2
SCP160	YJL080C	YJR142W	P47173	342 aa		2.58	□□□□□ -2
SCP160	YJL080C	ORC5	P50874	479 aa		2.58	□□□□□ -2
SCP160	YJL080C	YNL165W	P53891	406 aa		2.58	□□□□□ -2
SCP160	YJL080C	EEB1	Q02891	456 aa		2.58	□□□□□ -2
SCP160	YJL080C	DON1	Q05610	365 aa		2.58	□□□□□ -2
SCP160	YJL080C	YLR257W	Q06146	321 aa	Known RBP	2.58	□□□□□ -2
SCP160	YJL080C	IRC10	Q08118	586 aa		2.58	□□□□□ -2
SCP160	YJL080C	TCO89	Q08921	799 aa		2.58	□□□□□ -2
SCP160	YJL080C	YPL277C	Q08989	487 aa		2.58	□□□□□ -2
SCP160	YJL080C	RRD2	Q12461	358 aa		2.58	□□□□□ -2
SCP160	YJL080C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	RIP-Chip
SCP160	YJL080C	BET2	P20133	325 aa		2.57	□□□□□ -2
SCP160	YJL080C	PPZ1	P26570	692 aa		2.57	□□□□□ -2
SCP160	YJL080C	PEP7	P32609	515 aa		2.57	□□□□□ -2
SCP160	YJL080C	PPS1	P38148	807 aa		2.57	□□□□□ -2
SCP160	YJL080C	BOL3	P39724	118 aa		2.57	□□□□□ -2
SCP160	YJL080C	NPA3	P47122	385 aa		2.57	□□□□□ -2
SCP160	YJL080C	TOF1	P53840	1238 aa		2.57	□□□□□ -2
SCP160	YJL080C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
SCP160	YJL080C	ZPS1	Q12512	249 aa		2.57	□□□□□ -2
SCP160	YJL080C	GAL80	P04387	435 aa		2.57	□□□□□ -2
SCP160	YJL080C	KGD2	P19262	463 aa	Predicted RBP	2.57	□□□□□ -2
SCP160	YJL080C	RDS1	P25611	832 aa		2.57	□□□□□ -2
SCP160	YJL080C	MLF3	P32047	452 aa		2.57	□□□□□ -2
SCP160	YJL080C	MNN1	P39106	762 aa		2.57	□□□□□ -2
SCP160	YJL080C	YTA6	P40328	754 aa		2.57	□□□□□ -2
SCP160	YJL080C	NUT1	P53114	1132 aa		2.57	□□□□□ -2
SCP160	YJL080C	LSC2	P53312	427 aa		2.57	□□□□□ -2
SCP160	YJL080C	STP1	Q00947	519 aa		2.57	□□□□□ -2
SCP160	YJL080C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	RIP-Chip
SCP160	YJL080C	OPT2	Q06593	877 aa		2.57	□□□□□ -2
SCP160	YJL080C	SHS1	Q07657	551 aa		2.57	□□□□□ -2
SCP160	YJL080C	SGT2	Q12118	346 aa	Known RBP	2.57	□□□□□ -2
SCP160	YJL080C	APM4	Q99186	491 aa		2.57	□□□□□ -2
SCP160	YJL080C	RPN12	P32496	274 aa		2.57	□□□□□ -2
SCP160	YJL080C	MAF1	P41910	395 aa		2.57	□□□□□ -2
SCP160	YJL080C	FYV8	P46949	817 aa	Known RBP	2.57	□□□□□ -2
SCP160	YJL080C	SPC98	P53540	846 aa		2.57	□□□□□ -2
SCP160	YJL080C	LEE1	Q02799	301 aa	Known RBP	2.57	□□□□□ -2
SCP160	YJL080C	CWC21	Q03375	135 aa	Known RBP	2.57	□□□□□ -2
SCP160	YJL080C	CTF3	Q12748	733 aa		2.57	□□□□□ -2
SCP160	YJL080C	ASP3-2	P0CX77	362 aa		2.56	□□□□□ -2
SCP160	YJL080C	ASP3-3	P0CX78	362 aa		2.56	□□□□□ -2
SCP160	YJL080C	ASP3-4	P0CX79	362 aa		2.56	□□□□□ -2
SCP160	YJL080C	ASP3-1	P0CZ17	362 aa		2.56	□□□□□ -2
SCP160	YJL080C	BIK1	P11709	440 aa		2.56	□□□□□ -2
SCP160	YJL080C	NAT1	P12945	854 aa	Known RBP	2.56	□□□□□ -2
SCP160	YJL080C	RGD1	P38339	666 aa		2.56	□□□□□ -2
SCP160	YJL080C	SIP5	P40210	489 aa	Known RBP	2.56	□□□□□ -2
SCP160	YJL080C	SUM1	P46676	1062 aa		2.56	□□□□□ -2
SCP160	YJL080C	TAF1	P46677	1066 aa		2.56	□□□□□ -2
SCP160	YJL080C	DAS1	P47005	663 aa		2.56	□□□□□ -2
SCP160	YJL080C	YJR098C	P47139	656 aa		2.56	□□□□□ -2
SCP160	YJL080C	CCM1	P48237	864 aa	Predicted RBP	2.56	□□□□□ -2
SCP160	YJL080C	NBP1	P52919	319 aa	Predicted RBP	2.56	□□□□□ -2
SCP160	YJL080C	REC8	Q12188	680 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms