RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YIR007WP40566 764 aa5.27□□□□□ -1.57
VPS29YHR012W GYP8P43570 497 aa5.27□□□□□ -1.57
VPS29YHR012W NUP85P46673 744 aa5.27□□□□□ -1.57
VPS29YHR012W SMC3P47037 1230 aa5.27□□□□□ -1.57
VPS29YHR012W HSH155P49955 971 aaKnown RBP5.27□□□□□ -1.57
VPS29YHR012W SLG1P54867 378 aa5.27□□□□□ -1.57
VPS29YHR012W COG8Q04632 607 aa5.27□□□□□ -1.57
VPS29YHR012W MED1Q12321 566 aa5.27□□□□□ -1.57
VPS29YHR012W PDH1Q12428 516 aaKnown RBP5.27□□□□□ -1.57
VPS29YHR012W MPD2Q99316 277 aa5.27□□□□□ -1.57
VPS29YHR012W FMP27Q06179 2628 aa5.27□□□□□ -1.57
VPS29YHR012W CET1O13297 549 aaPredicted RBP5.26□□□□□ -1.57
VPS29YHR012W MTF1P14908 341 aaKnown RBP5.26□□□□□ -1.57
VPS29YHR012W RPC31P17890 251 aa5.26□□□□□ -1.57
VPS29YHR012W HIR1P32479 840 aa5.26□□□□□ -1.57
VPS29YHR012W MUD1P32605 298 aaKnown RBP5.26□□□□□ -1.57
VPS29YHR012W PEP7P32609 515 aa5.26□□□□□ -1.57
VPS29YHR012W PIN4P34217 668 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
VPS29YHR012W NEM1P38757 446 aa5.26□□□□□ -1.57
VPS29YHR012W KAP123P40069 1113 aaKnown RBP5.26□□□□□ -1.57
VPS29YHR012W YTA12P40341 825 aa5.26□□□□□ -1.57
VPS29YHR012W DAS1P47005 663 aa5.26□□□□□ -1.57
VPS29YHR012W FAA4P47912 694 aaKnown RBP5.26□□□□□ -1.57
VPS29YHR012W DON1Q05610 365 aa5.26□□□□□ -1.57
VPS29YHR012W YPR084WQ06821 456 aa5.26□□□□□ -1.57
VPS29YHR012W MEX67Q99257 599 aaKnown RBP5.26□□□□□ -1.57
VPS29YHR012W RPL22AP05749 121 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W RPS14AP06367 137 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W RPL4AP10664 362 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W DAL7P21826 554 aa5.25□□□□□ -1.57
VPS29YHR012W RDS1P25611 832 aa5.25□□□□□ -1.57
VPS29YHR012W SPT5P27692 1063 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W RPS14BP39516 138 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W NPA3P47122 385 aa5.25□□□□□ -1.57
VPS29YHR012W RPL4BP49626 362 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W ALT1P52893 592 aa5.25□□□□□ -1.57
VPS29YHR012W VPS20Q04272 221 aa5.25□□□□□ -1.57
VPS29YHR012W YDL057WQ07379 328 aa5.25□□□□□ -1.57
VPS29YHR012W PEX19Q07418 342 aa5.25□□□□□ -1.57
VPS29YHR012W RLP24Q07915 199 aaKnown RBP5.25□□□□□ -1.57
VPS29YHR012W PSR2Q07949 397 aa5.25□□□□□ -1.57
VPS29YHR012W FMP25Q08023 583 aa5.25□□□□□ -1.57
VPS29YHR012W CAN1P04817 590 aa5.24□□□□□ -1.57
VPS29YHR012W BIK1P11709 440 aa5.24□□□□□ -1.57
VPS29YHR012W SPO11P23179 398 aa5.24□□□□□ -1.57
VPS29YHR012W GAC1P28006 793 aa5.24□□□□□ -1.57
VPS29YHR012W TKL2P33315 681 aa5.24□□□□□ -1.57
VPS29YHR012W POL12P38121 705 aaPredicted RBP5.24□□□□□ -1.57
VPS29YHR012W RFT1P38206 574 aaPredicted RBP5.24□□□□□ -1.57
VPS29YHR012W SFB3P38810 929 aa5.24□□□□□ -1.57
VPS29YHR012W GGA2P38817 585 aaKnown RBP5.24□□□□□ -1.57
VPS29YHR012W NMD3P38861 518 aaKnown RBP5.24□□□□□ -1.57
VPS29YHR012W IES1P43579 692 aa5.24□□□□□ -1.57
VPS29YHR012W NUP42P49686 430 aaKnown RBP5.24□□□□□ -1.57
VPS29YHR012W UTP8P53276 713 aaKnown RBP5.24□□□□□ -1.57
VPS29YHR012W RPA49Q01080 415 aaPredicted RBP5.24□□□□□ -1.57
VPS29YHR012W YHM2Q04013 314 aa5.24□□□□□ -1.57
VPS29YHR012W YML053CQ04978 212 aa5.24□□□□□ -1.57
VPS29YHR012W CDD1Q06549 142 aa5.24□□□□□ -1.57
VPS29YHR012W GPM2Q12008 311 aa5.24□□□□□ -1.57
VPS29YHR012W HRT3Q12347 344 aa5.24□□□□□ -1.57
VPS29YHR012W TPK1P06244 397 aa5.23□□□□□ -1.57
VPS29YHR012W CHS2P14180 963 aa5.23□□□□□ -1.57
VPS29YHR012W CDC15P27636 974 aa5.23□□□□□ -1.57
VPS29YHR012W SWI3P32591 825 aa5.23□□□□□ -1.57
VPS29YHR012W COS5P47187 383 aa5.23□□□□□ -1.57
VPS29YHR012W NBP1P52919 319 aaPredicted RBP5.23□□□□□ -1.57
VPS29YHR012W WAR1Q03631 944 aa5.23□□□□□ -1.57
VPS29YHR012W SNU56Q03782 492 aaKnown RBP5.23□□□□□ -1.57
VPS29YHR012W MLH2Q07980 695 aa5.23□□□□□ -1.57
VPS29YHR012W TLG2Q08144 397 aa5.23□□□□□ -1.57
VPS29YHR012W TCO89Q08921 799 aa5.23□□□□□ -1.57
VPS29YHR012W TY1A-BLQ12266 440 aa5.23□□□□□ -1.57
VPS29YHR012W GIS3Q12418 502 aa5.23□□□□□ -1.57
VPS29YHR012W MAK16P10962 306 aaPredicted RBP5.22□□□□□ -1.57
VPS29YHR012W STE11P23561 717 aa5.22□□□□□ -1.57
VPS29YHR012W GPI10P30777 616 aa5.22□□□□□ -1.57
VPS29YHR012W EFB1P32471 206 aaKnown RBP5.22□□□□□ -1.57
VPS29YHR012W ECM32P32644 1121 aaKnown RBP5.22□□□□□ -1.57
VPS29YHR012W FRE1P32791 686 aa5.22□□□□□ -1.57
VPS29YHR012W YEL1P34225 687 aa5.22□□□□□ -1.57
VPS29YHR012W DUG2P38149 878 aa5.22□□□□□ -1.57
VPS29YHR012W CTM1P38818 585 aa5.22□□□□□ -1.57
VPS29YHR012W RAD55P38953 406 aa5.22□□□□□ -1.57
VPS29YHR012W GEM1P39722 662 aa5.22□□□□□ -1.57
VPS29YHR012W LCB2P40970 561 aa5.22□□□□□ -1.57
VPS29YHR012W LSB3P43603 459 aaKnown RBP5.22□□□□□ -1.57
VPS29YHR012W YNR061CP53747 219 aa5.22□□□□□ -1.57
VPS29YHR012W TIM8P57744 87 aa5.22□□□□□ -1.57
VPS29YHR012W CEG1Q01159 459 aaPredicted RBP5.22□□□□□ -1.57
VPS29YHR012W TBF1Q02457 562 aa5.22□□□□□ -1.57
VPS29YHR012W STE20Q03497 939 aaKnown RBP5.22□□□□□ -1.57
VPS29YHR012W GIR2Q03768 265 aaPredicted RBP5.22□□□□□ -1.57
VPS29YHR012W PRM6Q04705 352 aa5.22□□□□□ -1.57
VPS29YHR012W APC5Q08683 685 aa5.22□□□□□ -1.57
VPS29YHR012W FLC1Q08967 793 aa5.22□□□□□ -1.57
VPS29YHR012W YPR027CQ12079 277 aa5.22□□□□□ -1.57
VPS29YHR012W NDJ1Q12366 352 aa5.22□□□□□ -1.57
VPS29YHR012W GAL10P04397 699 aa5.21□□□□□ -1.58
VPS29YHR012W CHS1P08004 1131 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms