RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C PPM2Q08282 695 aa3.93□□□□□ -1.78
PDX1YGR193C YLR125WQ12138 136 aa3.93□□□□□ -1.78
PDX1YGR193C TMA17Q12513 150 aa3.93□□□□□ -1.78
PDX1YGR193C ENT1Q12518 454 aa3.93□□□□□ -1.78
PDX1YGR193C SKI3P17883 1432 aaKnown RBP3.93□□□□□ -1.78
PDX1YGR193C PMA1P05030 918 aaKnown RBP3.92□□□□□ -1.78
PDX1YGR193C FAR1P21268 830 aa3.92□□□□□ -1.78
PDX1YGR193C MLS1P30952 554 aa3.92□□□□□ -1.78
PDX1YGR193C RIB7P33312 244 aa3.92□□□□□ -1.78
PDX1YGR193C SLX1P38324 304 aa3.92□□□□□ -1.78
PDX1YGR193C PIH1P38768 344 aa3.92□□□□□ -1.78
PDX1YGR193C LRP1P38801 184 aaKnown RBP3.92□□□□□ -1.78
PDX1YGR193C CTM1P38818 585 aa3.92□□□□□ -1.78
PDX1YGR193C BEM4P39011 633 aa3.92□□□□□ -1.78
PDX1YGR193C CHZ1P40019 153 aaPredicted RBP3.92□□□□□ -1.78
PDX1YGR193C PCL7P40186 285 aa3.92□□□□□ -1.78
PDX1YGR193C TOK1P40310 691 aa3.92□□□□□ -1.78
PDX1YGR193C JEM1P40358 645 aa3.92□□□□□ -1.78
PDX1YGR193C MNT3P40549 630 aa3.92□□□□□ -1.78
PDX1YGR193C GPP1P41277 250 aaKnown RBP3.92□□□□□ -1.78
PDX1YGR193C IML2P47031 731 aa3.92□□□□□ -1.78
PDX1YGR193C TRF5P48561 642 aaKnown RBP3.92□□□□□ -1.78
PDX1YGR193C GIM3P53900 129 aa3.92□□□□□ -1.78
PDX1YGR193C YNL144CP53907 740 aa3.92□□□□□ -1.78
PDX1YGR193C SIW14P53965 281 aa3.92□□□□□ -1.78
PDX1YGR193C KIN4Q01919 800 aa3.92□□□□□ -1.78
PDX1YGR193C SIZ1Q04195 904 aa3.92□□□□□ -1.78
PDX1YGR193C SSQ1Q05931 657 aaPredicted RBP3.92□□□□□ -1.78
PDX1YGR193C OSH2Q12451 1283 aa3.92□□□□□ -1.78
PDX1YGR193C YMR084WA2P2R3 262 aa3.91□□□□□ -1.78
PDX1YGR193C PET494P07390 489 aaPredicted RBP3.91□□□□□ -1.78
PDX1YGR193C SST2P11972 698 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C KIN2P13186 1147 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C SEN2P16658 377 aa3.91□□□□□ -1.78
PDX1YGR193C SRP54P20424 541 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C PRE9P23638 258 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C PTR2P32901 601 aa3.91□□□□□ -1.78
PDX1YGR193C TIF3P34167 436 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C RGD1P38339 666 aa3.91□□□□□ -1.78
PDX1YGR193C PET100P38958 111 aa3.91□□□□□ -1.78
PDX1YGR193C VPS8P39702 1274 aa3.91□□□□□ -1.78
PDX1YGR193C TIF4631P39935 952 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C TMA108P40462 946 aa3.91□□□□□ -1.78
PDX1YGR193C GPD2P41911 440 aaKnown RBP3.91□□□□□ -1.78
PDX1YGR193C AGX1P43567 385 aa3.91□□□□□ -1.78
PDX1YGR193C SMC3P47037 1230 aa3.91□□□□□ -1.78
PDX1YGR193C ENT3P47160 408 aa3.91□□□□□ -1.78
PDX1YGR193C NUP84P52891 726 aa3.91□□□□□ -1.78
PDX1YGR193C PIP2P52960 996 aa3.91□□□□□ -1.78
PDX1YGR193C PEX14P53112 341 aa3.91□□□□□ -1.78
PDX1YGR193C MNP1P53163 194 aaPredicted RBP3.91□□□□□ -1.78
PDX1YGR193C FDC1Q03034 503 aa3.91□□□□□ -1.78
PDX1YGR193C YML131WQ03102 365 aa3.91□□□□□ -1.78
PDX1YGR193C YMR018WQ04364 514 aa3.91□□□□□ -1.78
PDX1YGR193C ARP9Q05123 467 aa3.91□□□□□ -1.78
PDX1YGR193C YDR338CQ05497 695 aa3.91□□□□□ -1.78
PDX1YGR193C MLH2Q07980 695 aa3.91□□□□□ -1.78
PDX1YGR193C SCM3Q12334 223 aa3.91□□□□□ -1.78
PDX1YGR193C HOM2P13663 365 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C RAD53P22216 821 aa3.9□□□□□ -1.79
PDX1YGR193C SEC15P22224 910 aa3.9□□□□□ -1.79
PDX1YGR193C CHS3P29465 1165 aa3.9□□□□□ -1.79
PDX1YGR193C HSP104P31539 908 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C THI4P32318 326 aa3.9□□□□□ -1.79
PDX1YGR193C ZUO1P32527 433 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C TFB1P32776 642 aa3.9□□□□□ -1.79
PDX1YGR193C TEF4P36008 412 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C MRPL40P36534 297 aa3.9□□□□□ -1.79
PDX1YGR193C TAF5P38129 798 aa3.9□□□□□ -1.79
PDX1YGR193C SMC2P38989 1170 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C MTW1P39731 289 aa3.9□□□□□ -1.79
PDX1YGR193C SIP5P40210 489 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C BNA1P47096 177 aa3.9□□□□□ -1.79
PDX1YGR193C SHE4P51534 789 aa3.9□□□□□ -1.79
PDX1YGR193C UBA2P52488 636 aa3.9□□□□□ -1.79
PDX1YGR193C PAP2P53632 584 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C VPS30Q02948 557 aa3.9□□□□□ -1.79
PDX1YGR193C RRN5Q02983 363 aa3.9□□□□□ -1.79
PDX1YGR193C VPS20Q04272 221 aa3.9□□□□□ -1.79
PDX1YGR193C CRN1Q06440 651 aa3.9□□□□□ -1.79
PDX1YGR193C OPY2Q06810 360 aa3.9□□□□□ -1.79
PDX1YGR193C CIR2Q08822 631 aa3.9□□□□□ -1.79
PDX1YGR193C NEW1Q08972 1196 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C RRP6Q12149 733 aaKnown RBP3.9□□□□□ -1.79
PDX1YGR193C TAF3Q12297 353 aa3.9□□□□□ -1.79
PDX1YGR193C ADE8P04161 214 aa3.89□□□□□ -1.79
PDX1YGR193C SES1P07284 462 aaKnown RBP3.89□□□□□ -1.79
PDX1YGR193C TRX1P22217 103 aaKnown RBP3.89□□□□□ -1.79
PDX1YGR193C SYP1P25623 870 aaKnown RBP3.89□□□□□ -1.79
PDX1YGR193C ITR1P30605 584 aa3.89□□□□□ -1.79
PDX1YGR193C DCG1P32460 244 aa3.89□□□□□ -1.79
PDX1YGR193C EUG1P32474 517 aa3.89□□□□□ -1.79
PDX1YGR193C KRE6P32486 720 aa3.89□□□□□ -1.79
PDX1YGR193C PEP7P32609 515 aa3.89□□□□□ -1.79
PDX1YGR193C TIM23P32897 222 aa3.89□□□□□ -1.79
PDX1YGR193C OPY1P38271 328 aa3.89□□□□□ -1.79
PDX1YGR193C BCD1P38772 366 aa3.89□□□□□ -1.79
PDX1YGR193C MSS4P38994 779 aa3.89□□□□□ -1.79
PDX1YGR193C ALD5P40047 520 aaKnown RBP3.89□□□□□ -1.79
PDX1YGR193C FYV10P40492 516 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms