RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W RIM4P38741 713 aa2.65□□□□□ -1.99
SMD1YGR074W VHR1P40522 640 aa2.65□□□□□ -1.99
SMD1YGR074W URM1P40554 99 aaPredicted RBP2.65□□□□□ -1.99
SMD1YGR074W ATG36P46983 293 aa2.65□□□□□ -1.99
SMD1YGR074W NIT2P47016 307 aa2.65□□□□□ -1.99
SMD1YGR074W PRP31P49704 494 aaPredicted RBP2.65□□□□□ -1.99
SMD1YGR074W STB4P50104 949 aa2.65□□□□□ -1.99
SMD1YGR074W HOL1P53389 586 aa2.65□□□□□ -1.99
SMD1YGR074W SUB1P54000 292 aaKnown RBP2.65□□□□□ -1.99
SMD1YGR074W SKY1Q03656 742 aa2.65□□□□□ -1.99
SMD1YGR074W OMS1Q06668 471 aa2.65□□□□□ -1.99
SMD1YGR074W PEX19Q07418 342 aa2.65□□□□□ -1.99
SMD1YGR074W WHI4Q07655 649 aaKnown RBP2.65□□□□□ -1.99
SMD1YGR074W IRC10Q08118 586 aa2.65□□□□□ -1.99
SMD1YGR074W UPC2Q12151 913 aa2.65□□□□□ -1.99
SMD1YGR074W COX11P19516 300 aaKnown RBP2.64□□□□□ -1.99
SMD1YGR074W SEC15P22224 910 aa2.64□□□□□ -1.99
SMD1YGR074W MIH1P23748 554 aa2.64□□□□□ -1.99
SMD1YGR074W YKU70P32807 602 aa2.64□□□□□ -1.99
SMD1YGR074W ENP1P38333 483 aaKnown RBP2.64□□□□□ -1.99
SMD1YGR074W MIP6P38760 659 aaKnown RBP2.64□□□□□ -1.99
SMD1YGR074W SSZ1P38788 538 aaKnown RBP2.64□□□□□ -1.99
SMD1YGR074W GPP2P40106 250 aaKnown RBP2.64□□□□□ -1.99
SMD1YGR074W PAP2P53632 584 aaKnown RBP2.64□□□□□ -1.99
SMD1YGR074W MUS81Q04149 632 aaPredicted RBP2.64□□□□□ -1.99
SMD1YGR074W YLR040CQ07988 224 aa2.64□□□□□ -1.99
SMD1YGR074W SGO1Q08490 590 aa2.64□□□□□ -1.99
SMD1YGR074W NPC2Q12408 173 aa2.64□□□□□ -1.99
SMD1YGR074W MPD2Q99316 277 aa2.64□□□□□ -1.99
SMD1YGR074W SST2P11972 698 aaKnown RBP2.63□□□□□ -1.99
SMD1YGR074W ERG4P25340 473 aa2.63□□□□□ -1.99
SMD1YGR074W PTP2P29461 750 aa2.63□□□□□ -1.99
SMD1YGR074W DGR2P32330 852 aa2.63□□□□□ -1.99
SMD1YGR074W DAL3P32459 195 aa2.63□□□□□ -1.99
SMD1YGR074W TRZ1P36159 838 aaPredicted RBP2.63□□□□□ -1.99
SMD1YGR074W RPP1P38786 293 aa2.63□□□□□ -1.99
SMD1YGR074W YHR202WP38887 602 aa2.63□□□□□ -1.99
SMD1YGR074W HXT6P39003 570 aaKnown RBP2.63□□□□□ -1.99
SMD1YGR074W HXT7P39004 570 aa2.63□□□□□ -1.99
SMD1YGR074W DUN1P39009 513 aa2.63□□□□□ -1.99
SMD1YGR074W PFA3P42836 336 aa2.63□□□□□ -1.99
SMD1YGR074W SET2P46995 733 aaKnown RBP2.63□□□□□ -1.99
SMD1YGR074W YJR039WP47107 1121 aa2.63□□□□□ -1.99
SMD1YGR074W ENP2P48234 707 aaKnown RBP2.63□□□□□ -1.99
SMD1YGR074W NCS6P53088 359 aa2.63□□□□□ -1.99
SMD1YGR074W COX18P53239 316 aa2.63□□□□□ -1.99
SMD1YGR074W ASI2P53895 289 aa2.63□□□□□ -1.99
SMD1YGR074W REC102Q02721 264 aa2.63□□□□□ -1.99
SMD1YGR074W CEF1Q03654 590 aaPredicted RBP2.63□□□□□ -1.99
SMD1YGR074W YMR206WQ03695 313 aa2.63□□□□□ -1.99
SMD1YGR074W ISA1Q07821 250 aaPredicted RBP2.63□□□□□ -1.99
SMD1YGR074W PEX15Q08215 383 aa2.63□□□□□ -1.99
SMD1YGR074W VHS3Q08438 674 aa2.63□□□□□ -1.99
SMD1YGR074W DIA2Q08496 732 aaPredicted RBP2.63□□□□□ -1.99
SMD1YGR074W HFI1Q12060 488 aa2.63□□□□□ -1.99
SMD1YGR074W TRM11Q12463 433 aa2.63□□□□□ -1.99
SMD1YGR074W APM4Q99186 491 aa2.63□□□□□ -1.99
SMD1YGR074W YLR415CO13578 112 aa2.62□□□□□ -1.99
SMD1YGR074W RPS21AP0C0V8 87 aaKnown RBP2.62□□□□□ -1.99
SMD1YGR074W KAR4P25583 335 aa2.62□□□□□ -1.99
SMD1YGR074W PWP2P25635 923 aaKnown RBP2.62□□□□□ -1.99
SMD1YGR074W PTH2P34222 208 aa2.62□□□□□ -1.99
SMD1YGR074W OAF3P36023 863 aa2.62□□□□□ -1.99
SMD1YGR074W AKL1P38080 1108 aaKnown RBP2.62□□□□□ -1.99
SMD1YGR074W PIP2P52960 996 aa2.62□□□□□ -1.99
SMD1YGR074W YNL034WP53963 612 aa2.62□□□□□ -1.99
SMD1YGR074W YNL018CP53976 612 aa2.62□□□□□ -1.99
SMD1YGR074W MET14Q02196 202 aa2.62□□□□□ -1.99
SMD1YGR074W RNT1Q02555 471 aa2.62□□□□□ -1.99
SMD1YGR074W NRG1Q03125 231 aa2.62□□□□□ -1.99
SMD1YGR074W GAD1Q04792 585 aa2.62□□□□□ -1.99
SMD1YGR074W YLR407WQ06070 228 aa2.62□□□□□ -1.99
SMD1YGR074W MLC2Q06580 163 aa2.62□□□□□ -1.99
SMD1YGR074W YOR378WQ08902 515 aa2.62□□□□□ -1.99
SMD1YGR074W DCS2Q12123 353 aa2.62□□□□□ -1.99
SMD1YGR074W NDJ1Q12366 352 aa2.62□□□□□ -1.99
SMD1YGR074W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
SMD1YGR074W RPS21BQ3E754 87 aaKnown RBP2.62□□□□□ -1.99
SMD1YGR074W RPS17AP02407 136 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W TRP4P07285 380 aaPredicted RBP2.61□□□□□ -1.99
SMD1YGR074W ERG20P08524 352 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W SWI6P09959 803 aa2.61□□□□□ -1.99
SMD1YGR074W RPS17BP14127 136 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W PHO81P17442 1178 aa2.61□□□□□ -1.99
SMD1YGR074W PRP22P24384 1145 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W KCC4P25389 1037 aa2.61□□□□□ -1.99
SMD1YGR074W SEC21P32074 935 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W HEM12P32347 362 aaPredicted RBP2.61□□□□□ -1.99
SMD1YGR074W STE14P32584 239 aa2.61□□□□□ -1.99
SMD1YGR074W APL2P36000 726 aaPredicted RBP2.61□□□□□ -1.99
SMD1YGR074W SDS22P36047 338 aa2.61□□□□□ -1.99
SMD1YGR074W TAF5P38129 798 aa2.61□□□□□ -1.99
SMD1YGR074W ECM1P39715 212 aa2.61□□□□□ -1.99
SMD1YGR074W SAW1P39735 261 aa2.61□□□□□ -1.99
SMD1YGR074W VPS27P40343 622 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W BRE5P53741 515 aaKnown RBP2.61□□□□□ -1.99
SMD1YGR074W ARP4P80428 489 aa2.61□□□□□ -1.99
SMD1YGR074W ARG5,6Q01217 863 aa2.61□□□□□ -1.99
SMD1YGR074W ATG16Q03818 150 aa2.61□□□□□ -1.99
SMD1YGR074W CTK1Q03957 528 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 124.9 ms