RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YKL033W-AQ86ZR7 236 aa3.11□□□□□ -1.91
SNX41YDR425W NOP14Q99207 810 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W PYC1P11154 1178 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W RPL8AP17076 256 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W RNR1P21524 888 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W PEX1P24004 1043 aa3.11□□□□□ -1.91
SNX41YDR425W MNN4P36044 1178 aa3.11□□□□□ -1.91
SNX41YDR425W PCL5P38794 229 aa3.11□□□□□ -1.91
SNX41YDR425W SET2P46995 733 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W PAN2P53010 1115 aaPredicted RBP3.11□□□□□ -1.91
SNX41YDR425W MET13P53128 600 aa3.11□□□□□ -1.91
SNX41YDR425W FHN1P53279 174 aa3.11□□□□□ -1.91
SNX41YDR425W LEE1Q02799 301 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W MRH1Q12117 320 aaPredicted RBP3.11□□□□□ -1.91
SNX41YDR425W TAF3Q12297 353 aa3.11□□□□□ -1.91
SNX41YDR425W PPG1P32838 368 aa3.1□□□□□ -1.91
SNX41YDR425W SEC6P32844 805 aa3.1□□□□□ -1.91
SNX41YDR425W YPT7P32939 208 aa3.1□□□□□ -1.91
SNX41YDR425W AKL1P38080 1108 aaKnown RBP3.1□□□□□ -1.91
SNX41YDR425W UBS1P38290 277 aa3.1□□□□□ -1.91
SNX41YDR425W HRB1P38922 454 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
SNX41YDR425W DOT6P40059 670 aaKnown RBP3.1□□□□□ -1.91
SNX41YDR425W NOP9P47077 666 aaKnown RBP3.1□□□□□ -1.91
SNX41YDR425W RGC1Q06108 1083 aaKnown RBP3.1□□□□□ -1.91
SNX41YDR425W SPT7P35177 1332 aa3.1□□□□□ -1.91
SNX41YDR425W BEM4P39011 633 aa3.09□□□□□ -1.91
SNX41YDR425W CLF1Q12309 687 aaPredicted RBP3.09□□□□□ -1.91
SNX41YDR425W XRN1P22147 1528 aaKnown RBP3.09□□□□□ -1.91
SNX41YDR425W UFD4P33202 1483 aa3.09□□□□□ -1.91
SNX41YDR425W IKI3Q06706 1349 aaKnown RBP3.09□□□□□ -1.92
SNX41YDR425W MVD1P32377 396 aaKnown RBP3.09□□□□□ -1.92
SNX41YDR425W PHO11P35842 467 aa3.09□□□□□ -1.92
SNX41YDR425W APN2P38207 520 aa3.09□□□□□ -1.92
SNX41YDR425W PHO12P38693 467 aa3.09□□□□□ -1.92
SNX41YDR425W CRP1P38845 465 aaKnown RBP3.09□□□□□ -1.92
SNX41YDR425W MNN1P39106 762 aa3.09□□□□□ -1.92
SNX41YDR425W UTP14Q04500 899 aaKnown RBP3.09□□□□□ -1.92
SNX41YDR425W THI22Q06490 572 aa3.09□□□□□ -1.92
SNX41YDR425W TCB3Q03640 1545 aaKnown RBP3.08□□□□□ -1.92
SNX41YDR425W YPT53P36019 220 aa3.08□□□□□ -1.92
SNX41YDR425W SFB3P38810 929 aa3.08□□□□□ -1.92
SNX41YDR425W CCT7P42943 550 aaKnown RBP3.08□□□□□ -1.92
SNX41YDR425W RSC8P43609 557 aaKnown RBP3.08□□□□□ -1.92
SNX41YDR425W VPS73P53142 486 aaKnown RBP3.08□□□□□ -1.92
SNX41YDR425W GUD1Q07729 489 aa3.08□□□□□ -1.92
SNX41YDR425W MLH3Q12083 715 aa3.08□□□□□ -1.92
SNX41YDR425W SUT2Q12286 268 aa3.08□□□□□ -1.92
SNX41YDR425W TRM732Q03496 1420 aa3.08□□□□□ -1.92
SNX41YDR425W MAL31P38156 614 aa3.07□□□□□ -1.92
SNX41YDR425W BIT2P38346 545 aa3.07□□□□□ -1.92
SNX41YDR425W ARG2P40360 574 aa3.07□□□□□ -1.92
SNX41YDR425W NDC80P40460 691 aa3.07□□□□□ -1.92
SNX41YDR425W TAH11P47112 604 aa3.07□□□□□ -1.92
SNX41YDR425W ATG4P53867 494 aa3.07□□□□□ -1.92
SNX41YDR425W ZRT2Q12436 422 aa3.07□□□□□ -1.92
SNX41YDR425W STH1P32597 1359 aa3.07□□□□□ -1.92
SNX41YDR425W GFA1P14742 717 aaKnown RBP3.07□□□□□ -1.92
SNX41YDR425W THR1P17423 357 aaKnown RBP3.07□□□□□ -1.92
SNX41YDR425W CDC43P18898 376 aa3.07□□□□□ -1.92
SNX41YDR425W KIN3P22209 435 aa3.07□□□□□ -1.92
SNX41YDR425W PRP28P23394 588 aa3.07□□□□□ -1.92
SNX41YDR425W CBR1P38626 284 aaKnown RBP3.07□□□□□ -1.92
SNX41YDR425W NUG1P40010 520 aaKnown RBP3.07□□□□□ -1.92
SNX41YDR425W GPD1Q00055 391 aaKnown RBP3.07□□□□□ -1.92
SNX41YDR425W SSM4P40318 1319 aa3.06□□□□□ -1.92
SNX41YDR425W SPP41P38904 1435 aa3.06□□□□□ -1.92
SNX41YDR425W DMC1P25453 334 aa3.06□□□□□ -1.92
SNX41YDR425W SFP1P32432 683 aa3.06□□□□□ -1.92
SNX41YDR425W BCS1P32839 456 aa3.06□□□□□ -1.92
SNX41YDR425W PRS1P32895 427 aaKnown RBP3.06□□□□□ -1.92
SNX41YDR425W TDP1P38319 544 aa3.06□□□□□ -1.92
SNX41YDR425W YHR202WP38887 602 aa3.06□□□□□ -1.92
SNX41YDR425W YJL206CP39529 758 aa3.06□□□□□ -1.92
SNX41YDR425W BDH2P39713 417 aa3.06□□□□□ -1.92
SNX41YDR425W DNM1P54861 757 aa3.06□□□□□ -1.92
SNX41YDR425W DIA2Q08496 732 aaPredicted RBP3.06□□□□□ -1.92
SNX41YDR425W ECM3Q99252 613 aa3.06□□□□□ -1.92
SNX41YDR425W HCA4P20448 770 aaKnown RBP3.05□□□□□ -1.92
SNX41YDR425W GLG1P36143 616 aa3.05□□□□□ -1.92
SNX41YDR425W CKB2P38930 258 aa3.05□□□□□ -1.92
SNX41YDR425W YNL195CP40168 261 aa3.05□□□□□ -1.92
SNX41YDR425W RET2P43621 546 aa3.05□□□□□ -1.92
SNX41YDR425W YJR096WP47137 282 aa3.05□□□□□ -1.92
SNX41YDR425W CTR1P49573 406 aa3.05□□□□□ -1.92
SNX41YDR425W SDA1P53313 767 aaKnown RBP3.05□□□□□ -1.92
SNX41YDR425W ILV6P25605 309 aaKnown RBP3.05□□□□□ -1.92
SNX41YDR425W PET127P32606 800 aa3.05□□□□□ -1.92
SNX41YDR425W CCT5P40413 562 aaKnown RBP3.05□□□□□ -1.92
SNX41YDR425W YIL166CP40445 542 aa3.05□□□□□ -1.92
SNX41YDR425W BIT61P47041 543 aa3.05□□□□□ -1.92
SNX41YDR425W ISA1Q07821 250 aaPredicted RBP3.05□□□□□ -1.92
SNX41YDR425W POM34Q12445 299 aa3.05□□□□□ -1.92
SNX41YDR425W SEC3P33332 1336 aaKnown RBP3.04□□□□□ -1.92
SNX41YDR425W SWI6P09959 803 aa3.04□□□□□ -1.92
SNX41YDR425W SET3P36124 751 aa3.04□□□□□ -1.92
SNX41YDR425W FPR3P38911 411 aaKnown RBP3.04□□□□□ -1.92
SNX41YDR425W PIG2P40187 538 aa3.04□□□□□ -1.92
SNX41YDR425W ATF1P40353 525 aa3.04□□□□□ -1.92
SNX41YDR425W COX18P53239 316 aa3.04□□□□□ -1.92
SNX41YDR425W VPS36Q06696 566 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms