RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	POB3	Q04636	552 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	ECI1	Q05871	280 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	RLP24	Q07915	199 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	TY1B-A	O13527	1196 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	YLR462W	O13556	202 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	TUB2	P02557	457 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	ARG4	P04076	463 aa	Predicted RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	YEL076C-A	P0CX16	216 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YLR464W	P0CX17	216 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	KIN1	P13185	1064 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	PMS1	P14242	873 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	KRS1	P15180	591 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	SAC7	P17121	654 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	NAR1	P23503	491 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	RPC19	P28000	142 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	NAM7	P30771	971 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	LOS1	P33418	1100 aa	Predicted RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	SEG2	P34250	1132 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	MRX3	P38172	270 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	RRT2	P38332	387 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	POP4	P38336	279 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YHL049C	P38722	271 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	PAN5	P38787	379 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YEL076C	P39971	216 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YEL075C	P39972	122 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YER189W	P40104	122 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	ULP2	P40537	1034 aa	Predicted RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	YFL064C	P43540	174 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YJR039W	P47107	1121 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	ILM1	P47155	203 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	DRN1	P53255	507 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	DIP5	P53388	608 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	KTR5	P53966	522 aa	Predicted RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	GTR1	Q00582	310 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	CWC21	Q03375	135 aa	Known RBP	3.51	□□□□□ -1.85
PSF1	YDR013W	SKG3	Q06315	1026 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
PSF1	YDR013W	YLL058W	Q12198	575 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	HIF1	Q12373	385 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	SPO21	Q12411	609 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	ARP6	Q12509	438 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	YBL111C	Q3E7Y5	667 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	PMD1	P32634	1753 aa		3.51	□□□□□ -1.85
PSF1	YDR013W	ADH4	P10127	382 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	SAM1	P10659	382 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	RAD18	P10862	487 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	VMA2	P16140	517 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	PRP4	P20053	465 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	CDC10	P25342	322 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	SUV3	P32580	737 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	SWI3	P32591	825 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	RAD5	P32849	1169 aa	Predicted RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	SWH1	P35845	1188 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	OCT1	P35999	772 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	OAF3	P36023	863 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	ERT1	P38140	529 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
PSF1	YDR013W	EXO5	P38289	585 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	VHC1	P38329	1120 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	RCK2	P38623	610 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	CBR1	P38626	284 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	NDT80	P38830	627 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	SET5	P38890	526 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	REV7	P38927	245 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	EAF5	P39995	279 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	YTA12	P40341	825 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	SAP185	P40856	1058 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	FET4	P40988	552 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	SEC27	P41811	889 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	CTK3	P46963	296 aa	Predicted RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	BRO1	P48582	844 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	HSH155	P49955	971 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	PSP2	P50109	593 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	ZIP2	P53061	704 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	ARI1	P53111	347 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	HOP2	P53187	214 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	YGR111W	P53265	400 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	YNL144C	P53907	740 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	COG6	P53959	839 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	VTC3	Q02725	835 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	YML037C	Q03703	340 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	PHM6	Q05637	104 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	PNP1	Q05788	311 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	YLR455W	Q06188	304 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	GPI13	Q07830	1017 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	YOR223W	Q12015	292 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	SLX4	Q12098	748 aa		3.5	□□□□□ -1.85
PSF1	YDR013W	FAS2	P19097	1887 aa	Known RBP	3.5	□□□□□ -1.85
PSF1	YDR013W	FLO1	P32768	1537 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	FIG2	P25653	1609 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	CMD1	P06787	147 aa	Known RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	ILV6	P25605	309 aa	Known RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	KIP1	P28742	1111 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	COQ2	P32378	372 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	PLC1	P32383	869 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	HXT1	P32465	570 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	EFB1	P32471	206 aa	Known RBP	3.49	□□□□□ -1.85
PSF1	YDR013W	YSC83	P32792	385 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	YME1	P32795	747 aa		3.49	□□□□□ -1.85
PSF1	YDR013W	SWE1	P32944	819 aa		3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms