RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C SSH4P32343 579 aa4.37□□□□□ -1.71
PRP11YDL043C KAE1P36132 386 aa4.37□□□□□ -1.71
PRP11YDL043C ERP2P39704 215 aa4.37□□□□□ -1.71
PRP11YDL043C VID28P40547 921 aa4.37□□□□□ -1.71
PRP11YDL043C MTR3P48240 250 aaPredicted RBP4.37□□□□□ -1.71
PRP11YDL043C ESF2P53743 316 aaKnown RBP4.37□□□□□ -1.71
PRP11YDL043C LEE1Q02799 301 aaKnown RBP4.37□□□□□ -1.71
PRP11YDL043C YDR341CQ05506 607 aaKnown RBP4.37□□□□□ -1.71
PRP11YDL043C APL5Q08951 932 aaKnown RBP4.37□□□□□ -1.71
PRP11YDL043C GAL10P04397 699 aa4.36□□□□□ -1.71
PRP11YDL043C GLN4P13188 809 aaKnown RBP4.36□□□□□ -1.71
PRP11YDL043C CDC26P14724 124 aa4.36□□□□□ -1.71
PRP11YDL043C CLC1P17891 233 aa4.36□□□□□ -1.71
PRP11YDL043C HXT4P32467 576 aa4.36□□□□□ -1.71
PRP11YDL043C PET309P32522 965 aaPredicted RBP4.36□□□□□ -1.71
PRP11YDL043C APN2P38207 520 aa4.36□□□□□ -1.71
PRP11YDL043C YHR202WP38887 602 aa4.36□□□□□ -1.71
PRP11YDL043C VPS27P40343 622 aaKnown RBP4.36□□□□□ -1.71
PRP11YDL043C YIL092WP40497 633 aa4.36□□□□□ -1.71
PRP11YDL043C SET2P46995 733 aaKnown RBP4.36□□□□□ -1.71
PRP11YDL043C ASK10P48361 1146 aa4.36□□□□□ -1.71
PRP11YDL043C NOP15P53927 220 aaPredicted RBP4.36□□□□□ -1.71
PRP11YDL043C ORC3P54790 616 aa4.36□□□□□ -1.71
PRP11YDL043C ORC4P54791 529 aa4.36□□□□□ -1.71
PRP11YDL043C MEH1Q02205 184 aa4.36□□□□□ -1.71
PRP11YDL043C YML131WQ03102 365 aa4.36□□□□□ -1.71
PRP11YDL043C YMR210WQ03649 449 aa4.36□□□□□ -1.71
PRP11YDL043C ASM4Q05166 528 aa4.36□□□□□ -1.71
PRP11YDL043C YLR407WQ06070 228 aa4.36□□□□□ -1.71
PRP11YDL043C COG4Q06096 861 aa4.36□□□□□ -1.71
PRP11YDL043C OMS1Q06668 471 aa4.36□□□□□ -1.71
PRP11YDL043C TPO1Q07824 586 aa4.36□□□□□ -1.71
PRP11YDL043C NGL1Q08213 363 aaKnown RBP4.36□□□□□ -1.71
PRP11YDL043C CWC2Q12046 339 aaPredicted RBP4.36□□□□□ -1.71
PRP11YDL043C CFT2Q12102 859 aaPredicted RBP4.36□□□□□ -1.71
PRP11YDL043C GPR1Q12361 961 aa4.36□□□□□ -1.71
PRP11YDL043C CYC1P00044 109 aaPredicted RBP4.35□□□□□ -1.71
PRP11YDL043C RPS17AP02407 136 aaKnown RBP4.35□□□□□ -1.71
PRP11YDL043C RPS17BP14127 136 aaKnown RBP4.35□□□□□ -1.71
PRP11YDL043C DGR2P32330 852 aa4.35□□□□□ -1.71
PRP11YDL043C STE14P32584 239 aa4.35□□□□□ -1.71
PRP11YDL043C SRP68P38687 599 aaKnown RBP4.35□□□□□ -1.71
PRP11YDL043C NPR3P38742 1146 aa4.35□□□□□ -1.71
PRP11YDL043C SAK1P38990 1142 aa4.35□□□□□ -1.71
PRP11YDL043C SAW1P39735 261 aa4.35□□□□□ -1.71
PRP11YDL043C PZF1P39933 429 aa4.35□□□□□ -1.71
PRP11YDL043C EAF5P39995 279 aa4.35□□□□□ -1.71
PRP11YDL043C URM1P40554 99 aaPredicted RBP4.35□□□□□ -1.71
PRP11YDL043C IES1P43579 692 aa4.35□□□□□ -1.71
PRP11YDL043C IRC5P43610 853 aa4.35□□□□□ -1.71
PRP11YDL043C PUS4P48567 403 aaKnown RBP4.35□□□□□ -1.71
PRP11YDL043C TEP1P53916 434 aa4.35□□□□□ -1.71
PRP11YDL043C HLR1Q04429 423 aa4.35□□□□□ -1.71
PRP11YDL043C WHI4Q07655 649 aaKnown RBP4.35□□□□□ -1.71
PRP11YDL043C ADY3Q07732 790 aa4.35□□□□□ -1.71
PRP11YDL043C PSK2Q08217 1101 aa4.35□□□□□ -1.71
PRP11YDL043C NUR1Q12066 484 aa4.35□□□□□ -1.71
PRP11YDL043C UPC2Q12151 913 aa4.35□□□□□ -1.71
PRP11YDL043C MSM1P22438 575 aa4.34□□□□□ -1.71
PRP11YDL043C PHO3P24031 467 aa4.34□□□□□ -1.71
PRP11YDL043C IMG2P25642 146 aaPredicted RBP4.34□□□□□ -1.71
PRP11YDL043C MSH1P25846 959 aa4.34□□□□□ -1.71
PRP11YDL043C DEP1P31385 405 aa4.34□□□□□ -1.71
PRP11YDL043C SDS22P36047 338 aa4.34□□□□□ -1.71
PRP11YDL043C NOC2P39744 710 aaKnown RBP4.34□□□□□ -1.71
PRP11YDL043C STL1P39932 569 aa4.34□□□□□ -1.71
PRP11YDL043C GID8P40208 455 aa4.34□□□□□ -1.71
PRP11YDL043C ENP2P48234 707 aaKnown RBP4.34□□□□□ -1.71
PRP11YDL043C HOS2P53096 452 aaPredicted RBP4.34□□□□□ -1.71
PRP11YDL043C MTD1Q02046 320 aaKnown RBP4.34□□□□□ -1.71
PRP11YDL043C PRP3Q03338 469 aaPredicted RBP4.34□□□□□ -1.71
PRP11YDL043C MUS81Q04149 632 aaPredicted RBP4.34□□□□□ -1.71
PRP11YDL043C HIM1Q06674 414 aa4.34□□□□□ -1.71
PRP11YDL043C GLE1Q12315 538 aa4.34□□□□□ -1.71
PRP11YDL043C ARP7Q12406 477 aa4.34□□□□□ -1.71
PRP11YDL043C SEC3P33332 1336 aaKnown RBP4.34□□□□□ -1.71
PRP11YDL043C CYC7P00045 113 aa4.33□□□□□ -1.72
PRP11YDL043C RPP2AP05319 106 aaKnown RBP4.33□□□□□ -1.72
PRP11YDL043C SEC18P18759 758 aaKnown RBP4.33□□□□□ -1.72
PRP11YDL043C ACO1P19414 778 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PRP11YDL043C SED4P25365 1065 aa4.33□□□□□ -1.72
PRP11YDL043C MF(ALPHA)2P32435 120 aa4.33□□□□□ -1.72
PRP11YDL043C RPN12P32496 274 aa4.33□□□□□ -1.72
PRP11YDL043C BLI1P35727 113 aa4.33□□□□□ -1.72
PRP11YDL043C DUN1P39009 513 aa4.33□□□□□ -1.72
PRP11YDL043C FAF1P40546 346 aaPredicted RBP4.33□□□□□ -1.72
PRP11YDL043C PFA3P42836 336 aa4.33□□□□□ -1.72
PRP11YDL043C MET12P46151 657 aa4.33□□□□□ -1.72
PRP11YDL043C TAF1P46677 1066 aa4.33□□□□□ -1.72
PRP11YDL043C EXG2P52911 562 aa4.33□□□□□ -1.72
PRP11YDL043C ASI2P53895 289 aa4.33□□□□□ -1.72
PRP11YDL043C TRS130Q03660 1102 aa4.33□□□□□ -1.72
PRP11YDL043C YPS7Q06325 596 aa4.33□□□□□ -1.72
PRP11YDL043C PSF3Q12146 194 aa4.33□□□□□ -1.72
PRP11YDL043C YEL076C-AP0CX16 216 aa4.32□□□□□ -1.72
PRP11YDL043C YLR464WP0CX17 216 aa4.32□□□□□ -1.72
PRP11YDL043C TGL1P34163 548 aa4.32□□□□□ -1.72
PRP11YDL043C YEL076CP39971 216 aa4.32□□□□□ -1.72
PRP11YDL043C SCS2P40075 244 aaKnown RBP4.32□□□□□ -1.72
PRP11YDL043C ERR3P42222 437 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms