RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 OTUD7AQ8TE49 926 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-224ENST00000641711 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
PHGDH-224ENST00000641711 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
PHGDH-224ENST00000641711 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.41
PHGDH-224ENST00000641711 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-224ENST00000641711 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
PHGDH-224ENST00000641711 SMARCA5O60264 1052 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-224ENST00000641711 UFL1O94874 794 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 PDE1AP54750 535 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 GPSM2P81274 684 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 RASSF7Q02833 373 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 CHRNDQ07001 517 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 HSP90AB4PQ58FF6 505 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 SNX21Q969T3 373 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 STAP2Q9UGK3 403 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
PHGDH-224ENST00000641711 AOX1Q06278 1338 aa12.51□□□□□ -0.41
PHGDH-224ENST00000641711 GOLGB1Q14789 3259 aaKnown RBP12.51□□□□□ -0.41
PHGDH-224ENST00000641711 SDSP20132 328 aa12.5□□□□□ -0.41
PHGDH-224ENST00000641711 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
PHGDH-224ENST00000641711 TBC1D16Q8TBP0 767 aa12.5□□□□□ -0.41
PHGDH-224ENST00000641711 JDP2Q8WYK2 163 aa12.5□□□□□ -0.41
PHGDH-224ENST00000641711 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-224ENST00000641711 RNF181Q9P0P0 153 aa12.5□□□□□ -0.41
PHGDH-224ENST00000641711 EXOC6BQ9Y2D4 811 aa12.5□□□□□ -0.41
PHGDH-224ENST00000641711 MYH13Q9UKX3 1938 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 ZNF609O15014 1411 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 ZBTB22O15209 634 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 PPIP5K2O43314 1243 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 PDE8BO95263 885 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 NBR1Q14596 966 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 METTL24Q5JXM2 366 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 C9orf131Q5VYM1 1079 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
PHGDH-224ENST00000641711 C6orf229H3BNL8 230 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 KCNJ4P48050 445 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.417e-8■■■■□ 25.2
PHGDH-224ENST00000641711 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
PHGDH-224ENST00000641711 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 CASC1Q6TDU7 716 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 ZC3H12CQ9C0D7 883 aaKnown RBP12.48□□□□□ -0.41
PHGDH-224ENST00000641711 ANTXR1Q9H6X2 564 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 GPR108Q9NPR9 543 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-224ENST00000641711 CEP126Q9P2H0 1117 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
PHGDH-224ENST00000641711 APBB1O00213 710 aa12.47□□□□□ -0.41
PHGDH-224ENST00000641711 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
PHGDH-224ENST00000641711 MX1P20591 662 aa12.47□□□□□ -0.41
PHGDH-224ENST00000641711 KIF2CQ99661 725 aa12.47□□□□□ -0.41
PHGDH-224ENST00000641711 PUS3Q9BZE2 481 aaKnown RBP12.47□□□□□ -0.41
PHGDH-224ENST00000641711 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
PHGDH-224ENST00000641711 AKAP2Q9Y2D5 859 aa12.47□□□□□ -0.41
PHGDH-224ENST00000641711 SCN4AP35499 1836 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 IRS2Q9Y4H2 1338 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 COL4A5P29400 1685 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 FZD9O00144 591 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 FGFR2P21802 821 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 AOC3Q16853 763 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 ZNF804AQ7Z570 1209 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 PODNQ7Z5L7 613 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 LPIN2Q92539 896 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 KIF1BPQ96EK5 621 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 PA2G4Q9UQ80 394 aaKnown RBP12.46□□□□□ -0.41
PHGDH-224ENST00000641711 SCN9AQ15858 1988 aa12.46□□□□□ -0.41
PHGDH-224ENST00000641711 WDR90Q96KV7 1748 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
PHGDH-224ENST00000641711 SLC5A1P13866 664 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 PRELPP51888 382 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 EIF6P56537 245 aaKnown RBP12.45□□□□□ -0.42
PHGDH-224ENST00000641711 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 HSCBQ8IWL3 235 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 SIL1Q9H173 461 aa12.45□□□□□ -0.42
PHGDH-224ENST00000641711 ZNF646O15015 1829 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-224ENST00000641711 REC8O95072 547 aa12.44□□□□□ -0.42
PHGDH-224ENST00000641711 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-224ENST00000641711 ATP2B3Q16720 1220 aa12.44□□□□□ -0.42
PHGDH-224ENST00000641711 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
PHGDH-224ENST00000641711 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
PHGDH-224ENST00000641711 G3V3G9 751 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 ERC2O15083 957 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
PHGDH-224ENST00000641711 ECE2O60344 883 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 TAF5LO75529 589 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 MMP14P50281 582 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 TNIP1Q15025 636 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 CAVIN4Q5BKX8 364 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
PHGDH-224ENST00000641711 GPC2Q8N158 579 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms