RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 APAF1O14727 1248 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 CTSWP56202 376 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-222ENST00000641587 GREM2Q9H772 168 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 HTTP42858 3142 aa12.89□□□□□ -0.35
PHGDH-222ENST00000641587 CENPFP49454 3210 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 SASH1O94885 1247 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 FKBP1BP68106 108 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-222ENST00000641587 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 MED23Q9ULK4 1368 aa12.88□□□□□ -0.35
PHGDH-222ENST00000641587 WNT10BO00744 389 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
PHGDH-222ENST00000641587 KLRK1P26718 216 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 PRKG1Q13976 671 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-222ENST00000641587 TTLL11Q8NHH1 800 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 BRCA2P51587 3418 aa12.87□□□□□ -0.35
PHGDH-222ENST00000641587 CCT4P50991 539 aaKnown RBP12.86□□□□□ -0.35
PHGDH-222ENST00000641587 GNAI1P63096 354 aa12.86□□□□□ -0.35
PHGDH-222ENST00000641587 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
PHGDH-222ENST00000641587 CDC5LQ99459 802 aaKnown RBP12.86□□□□□ -0.35
PHGDH-222ENST00000641587 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
PHGDH-222ENST00000641587 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
PHGDH-222ENST00000641587 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
PHGDH-222ENST00000641587 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
PHGDH-222ENST00000641587 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
PHGDH-222ENST00000641587 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-222ENST00000641587 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
PHGDH-222ENST00000641587 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-222ENST00000641587 GPR25O00155 361 aa12.84□□□□□ -0.35
PHGDH-222ENST00000641587 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
PHGDH-222ENST00000641587 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
PHGDH-222ENST00000641587 KIAA0825Q8IV33 1275 aa12.84□□□□□ -0.35
PHGDH-222ENST00000641587 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
PHGDH-222ENST00000641587 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-222ENST00000641587 NEURL1BA8MQ27 555 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 SNAP23O00161 211 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 TM4SF4P48230 202 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 STRIP1Q5VSL9 837 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
PHGDH-222ENST00000641587 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 G2E3Q7L622 706 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
PHGDH-222ENST00000641587 SSC5DA1L4H1 1573 aa12.82□□□□□ -0.36
PHGDH-222ENST00000641587 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
PHGDH-222ENST00000641587 GTF2IP78347 998 aa12.82□□□□□ -0.36
PHGDH-222ENST00000641587 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
PHGDH-222ENST00000641587 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
PHGDH-222ENST00000641587 ITGA6P23229 1130 aa12.81□□□□□ -0.36
PHGDH-222ENST00000641587 NF2P35240 595 aa12.81□□□□□ -0.36
PHGDH-222ENST00000641587 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
PHGDH-222ENST00000641587 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
PHGDH-222ENST00000641587 TTLL5Q6EMB2 1281 aa12.81□□□□□ -0.36
PHGDH-222ENST00000641587 ZBED3Q96IU2 234 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-222ENST00000641587 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
PHGDH-222ENST00000641587 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
PHGDH-222ENST00000641587 FKTNO75072 461 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
PHGDH-222ENST00000641587 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 SREBF2Q12772 1141 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 LDLRAD1Q5T700 205 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-222ENST00000641587 ARMC9Q7Z3E5 817 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 APOBEC3FQ8IUX4 373 aaKnown RBP12.8□□□□□ -0.36
PHGDH-222ENST00000641587 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 CLMNQ96JQ2 1002 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 ECM29Q5VYK3 1845 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 AOX1Q06278 1338 aa12.8□□□□□ -0.36
PHGDH-222ENST00000641587 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-222ENST00000641587 H7C1W4 665 aa12.79□□□□□ -0.36
PHGDH-222ENST00000641587 CASP7P55210 303 aa12.79□□□□□ -0.36
PHGDH-222ENST00000641587 CHRNDQ07001 517 aa12.79□□□□□ -0.36
PHGDH-222ENST00000641587 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-222ENST00000641587 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 GCKRQ14397 625 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
PHGDH-222ENST00000641587 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-222ENST00000641587 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 DEFB129Q9H1M3 183 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
PHGDH-222ENST00000641587 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms