RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
SCARB2-224ENST00000640880 OR13H1Q8NG92 308 aa9.61□□□□□ -0.87
SCARB2-224ENST00000640880 ANKRD24Q8TF21 1146 aa9.61□□□□□ -0.87
SCARB2-224ENST00000640880 SALL4Q9UJQ4 1053 aa9.61□□□□□ -0.87
SCARB2-224ENST00000640880 MRVI1Q9Y6F6 885 aa9.61□□□□□ -0.87
SCARB2-224ENST00000640880 MRPL42Q9Y6G3 142 aaKnown RBP9.61□□□□□ -0.87
SCARB2-224ENST00000640880 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
SCARB2-224ENST00000640880 CCINQ13939 588 aa9.6□□□□□ -0.87
SCARB2-224ENST00000640880 TCEAL1Q15170 157 aa9.6□□□□□ -0.87
SCARB2-224ENST00000640880 TPTE2Q6XPS3 522 aa9.6□□□□□ -0.87
SCARB2-224ENST00000640880 RHOVQ96L33 236 aa9.6□□□□□ -0.87
SCARB2-224ENST00000640880 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
SCARB2-224ENST00000640880 F11P03951 625 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 RARAP10276 462 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 ETFBP38117 255 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 KCNQ4P56696 695 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 FBXL19Q6PCT2 694 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 ANKS3Q6ZW76 656 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 PHC3Q8NDX5 983 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 TCF12Q99081 682 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 GAS2L1Q99501 681 aaPredicted RBP9.59□□□□□ -0.87
SCARB2-224ENST00000640880 NT5C1AQ9BXI3 368 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 DYRK1BQ9Y463 629 aa9.59□□□□□ -0.87
SCARB2-224ENST00000640880 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
SCARB2-224ENST00000640880 CELA3AP09093 270 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 SOX9P48436 509 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 LIG3P49916 1009 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 PRR20EP86478 221 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 PRR20CP86479 221 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 PRR20DP86480 221 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 PRR20BP86481 221 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 PRR20AP86496 221 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 SFSWAPQ12872 951 aaKnown RBP9.58□□□□□ -0.88
SCARB2-224ENST00000640880 EFHC2Q5JST6 749 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 NCAPG2Q86XI2 1143 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 ZKSCAN3Q9BRR0 538 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 TRIM55Q9BYV6 548 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 GSX2Q9BZM3 304 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 TLR6Q9Y2C9 796 aa9.58□□□□□ -0.88
SCARB2-224ENST00000640880 PF4P02776 101 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 SCARF1Q14162 830 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 SNAP47Q5SQN1 464 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 CCNJLQ8IV13 435 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 CPLX3Q8WVH0 158 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 MKL1Q969V6 931 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 SPACA7Q96KW9 195 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 CNTNAP3BQ96NU0 1288 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 OSMRQ99650 979 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 CNTNAP3Q9BZ76 1288 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 KCNQ5Q9NR82 932 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 ZFATQ9P243 1243 aa9.57□□□□□ -0.88
SCARB2-224ENST00000640880 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-224ENST00000640880 RGS20O76081 388 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 ACPPP15309 386 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 GARTP22102 1010 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 COL9A2Q14055 689 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-224ENST00000640880 PNMA5Q96PV4 448 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 SRPK1Q96SB4 655 aaKnown RBP9.56□□□□□ -0.88
SCARB2-224ENST00000640880 IRX2Q9BZI1 471 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-224ENST00000640880 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 SIRPGQ9P1W8 387 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
SCARB2-224ENST00000640880 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
SCARB2-224ENST00000640880 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 U2SURPO15042 1029 aaKnown RBP9.55□□□□□ -0.88
SCARB2-224ENST00000640880 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-224ENST00000640880 PSAPP07602 524 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 FAM157BP0CG42 384 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 NFKB1P19838 968 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 COL13A1Q5TAT6 717 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-224ENST00000640880 GOLM1Q8NBJ4 401 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 HNRNPLLQ8WVV9 542 aaKnown RBP9.55□□□□□ -0.88
SCARB2-224ENST00000640880 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 ZFYVE1Q9HBF4 777 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 CUX1P39880 1505 aa9.55□□□□□ -0.88
SCARB2-224ENST00000640880 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 KHNYNO15037 678 aaKnown RBP9.54□□□□□ -0.88
SCARB2-224ENST00000640880 EFSO43281 561 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 KLF4O43474 513 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 GREM1O60565 184 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 TRPA1O75762 1119 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 CLSTN1O94985 981 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 KIF4AO95239 1232 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 BMP1P13497 986 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 HSD3B2P26439 372 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 GRIA4P48058 902 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 HYAL2Q12891 473 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 CAMK2GQ13555 558 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-224ENST00000640880 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
SCARB2-224ENST00000640880 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
SCARB2-224ENST00000640880 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
SCARB2-224ENST00000640880 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
SCARB2-224ENST00000640880 LMNB2Q03252 620 aa9.53□□□□□ -0.88
SCARB2-224ENST00000640880 RAB33AQ14088 237 aa9.53□□□□□ -0.88
SCARB2-224ENST00000640880 PCNX4Q63HM2 1172 aa9.53□□□□□ -0.88
SCARB2-224ENST00000640880 TTBK2Q6IQ55 1244 aa9.53□□□□□ -0.88
SCARB2-224ENST00000640880 NKD1Q969G9 470 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms