RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 ANKRD18AQ8IVF6 992 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 KLHL34Q8N239 644 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 ANP32BQ92688 251 aaKnown RBP9.87□□□□□ -0.83
PNKP-231ENST00000640501 GJD4Q96KN9 370 aaPredicted RBP9.87□□□□□ -0.83
PNKP-231ENST00000640501 NARFQ9UHQ1 456 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 NPHP1O15259 732 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 STX6O43752 255 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 DHX16O60231 1041 aaKnown RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 LY75O60449 1722 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 IGSF3O75054 1194 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 ATRNO75882 1429 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 MRE11P49959 708 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 TRDNQ13061 729 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 UBE3CQ15386 1083 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 ADCK5Q3MIX3 580 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 TMED8Q6PL24 325 aaPredicted RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 TPTE2Q6XPS3 522 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 AEBP2Q6ZN18 517 aaPredicted RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 DHX32Q7L7V1 743 aaKnown RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 EDC3Q96F86 508 aaKnown RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 SETDB2Q96T68 719 aa9.86□□□□□ -0.83
PNKP-231ENST00000640501 CCNL1Q9UK58 526 aaPredicted RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 MYH14Q7Z406 1995 aaKnown RBP9.86□□□□□ -0.83
PNKP-231ENST00000640501 MAST3O60307 1309 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 FAM177BA6PVY3 158 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 KCNQ2O43526 872 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 ZSCAN22P10073 491 aaPredicted RBP9.85□□□□□ -0.83
PNKP-231ENST00000640501 HSPD1P10809 573 aaKnown RBP9.85□□□□□ -0.83
PNKP-231ENST00000640501 HCLS1P14317 486 aaPredicted RBP9.85□□□□□ -0.83
PNKP-231ENST00000640501 ADRA2BP18089 450 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 GNAT2P19087 354 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 ZAP70P43403 619 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 SF3B3Q15393 1217 aaKnown RBP9.85□□□□□ -0.83
PNKP-231ENST00000640501 CAVIN4Q5BKX8 364 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 CCDC102BQ68D86 513 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 RALYLQ86SE5 291 aaKnown RBP9.85□□□□□ -0.83
PNKP-231ENST00000640501 CCDC83Q8IWF9 413 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 VGLL2Q8N8G2 317 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 LINC00116Q8NCU8 138 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 LLPHQ9BRT6 129 aaKnown RBP9.85□□□□□ -0.83
PNKP-231ENST00000640501 ANKRD2Q9GZV1 360 aa9.85□□□□□ -0.83
PNKP-231ENST00000640501 ZMYM6O95789 1325 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 WDR19Q8NEZ3 1342 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 ZNF213O14771 459 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 SEMA3EO15041 775 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 CYP21A2P08686 494 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 GJB2P29033 226 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 ADORA1P30542 326 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 HMGN5P82970 282 aaKnown RBP9.84□□□□□ -0.83
PNKP-231ENST00000640501 UBE4AQ14139 1066 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 SLC10A5Q5PT55 438 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 SLC9C2Q5TAH2 1124 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 LARP1BQ659C4 914 aaKnown RBP9.84□□□□□ -0.83
PNKP-231ENST00000640501 NBPF5PQ86XG9 351 aaPredicted RBP9.84□□□□□ -0.83
PNKP-231ENST00000640501 SPATA5Q8NB90 893 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 NACAP1Q9BZK3 213 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 GZF1Q9H116 711 aaPredicted RBP9.84□□□□□ -0.83
PNKP-231ENST00000640501 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 COL24A1Q17RW2 1714 aa9.84□□□□□ -0.83
PNKP-231ENST00000640501 AFF2P51816 1311 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 GNPATO15228 680 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 ONECUT3O60422 494 aaPredicted RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 PRPF40AO75400 957 aaKnown RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 IDH1O75874 414 aaKnown RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 LETM1O95202 739 aaPredicted RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 F13A1P00488 732 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 SYT1P21579 422 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 FGFR2P21802 821 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 MCM5P33992 734 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 RFC4P35249 363 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 ADD2P35612 726 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 MCAMP43121 646 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 TRAPPC3LQ5T215 181 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 CCDC129Q6ZRS4 1044 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 Q6ZUG5 572 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 VPS37DQ86XT2 251 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 SYNE4Q8N205 404 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 FBXL16Q8N461 479 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 FAM184AQ8NB25 1140 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 NCOA7Q8NI08 942 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 SEC62Q99442 399 aaKnown RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 BSDC1Q9NW68 430 aaPredicted RBP9.83□□□□□ -0.84
PNKP-231ENST00000640501 NDUFB9Q9Y6M9 179 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 SBF2Q86WG5 1849 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 TAF1LQ8IZX4 1826 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 DOCK2Q92608 1830 aa9.83□□□□□ -0.84
PNKP-231ENST00000640501 AKAP11Q9UKA4 1901 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 E7EWF7 191 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 GPAA1O43292 621 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 APPP05067 770 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 ME3Q16798 604 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 SLC27A3Q5K4L6 730 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 GTF3C6Q969F1 213 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 ZNF274Q96GC6 653 aaPredicted RBP9.82□□□□□ -0.84
PNKP-231ENST00000640501 CNNM2Q9H8M5 875 aa9.82□□□□□ -0.84
PNKP-231ENST00000640501 LMBRD1Q9NUN5 540 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms