RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 CD99L2Q8TCZ2 262 aa17.78■□□□□ 0.44
HLA-C-210ENST00000640219 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
HLA-C-210ENST00000640219 EFCC1Q9HA90 598 aa17.78■□□□□ 0.44
HLA-C-210ENST00000640219 ANGEL1Q9UNK9 670 aaKnown RBP17.78■□□□□ 0.44
HLA-C-210ENST00000640219 CENPFP49454 3210 aa17.78■□□□□ 0.44
HLA-C-210ENST00000640219 WNT10BO00744 389 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 ANP32CO43423 234 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 OGFOD1Q8N543 542 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 PLBD2Q8NHP8 589 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 SLC10A4Q96EP9 437 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
HLA-C-210ENST00000640219 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
HLA-C-210ENST00000640219 PSME4Q14997 1843 aa17.77■□□□□ 0.43
HLA-C-210ENST00000640219 H0YGN5 161 aa17.76■□□□□ 0.43
HLA-C-210ENST00000640219 SLC17A8Q8NDX2 589 aa17.76■□□□□ 0.43
HLA-C-210ENST00000640219 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
HLA-C-210ENST00000640219 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
HLA-C-210ENST00000640219 IGF2BP3O00425 579 aaKnown RBP eCLIP17.75■□□□□ 0.43
HLA-C-210ENST00000640219 ANKRD13DQ6ZTN6 518 aa17.75■□□□□ 0.43
HLA-C-210ENST00000640219 PNNQ9H307 717 aaKnown RBP17.75■□□□□ 0.43
HLA-C-210ENST00000640219 SASH1O94885 1247 aa17.74■□□□□ 0.43
HLA-C-210ENST00000640219 APOBEC3FQ8IUX4 373 aaKnown RBP17.74■□□□□ 0.43
HLA-C-210ENST00000640219 ZNF333Q96JL9 665 aa17.74■□□□□ 0.43
HLA-C-210ENST00000640219 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
HLA-C-210ENST00000640219 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
HLA-C-210ENST00000640219 FZD1Q9UP38 647 aa17.74■□□□□ 0.43
HLA-C-210ENST00000640219 BRCA2P51587 3418 aa17.74■□□□□ 0.43
HLA-C-210ENST00000640219 XDHP47989 1333 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 TRIOBPQ9H2D6 2365 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 APAF1O14727 1248 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 ZBTB48P10074 688 aaPredicted RBP17.73■□□□□ 0.43
HLA-C-210ENST00000640219 ATP2B4P23634 1241 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 SP3Q02447 781 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 CRHR2Q13324 411 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 DACT2Q5SW24 774 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 OTUD7BQ6GQQ9 843 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 FBXW7Q969H0 707 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 WNK4Q96J92 1243 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
HLA-C-210ENST00000640219 SZT2Q5T011 3432 aa17.73■□□□□ 0.43
HLA-C-210ENST00000640219 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
HLA-C-210ENST00000640219 NBPF11Q86T75 865 aa17.72■□□□□ 0.43
HLA-C-210ENST00000640219 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
HLA-C-210ENST00000640219 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
HLA-C-210ENST00000640219 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
HLA-C-210ENST00000640219 SLC9C1Q4G0N8 1177 aa17.71■□□□□ 0.43
HLA-C-210ENST00000640219 CLMNQ96JQ2 1002 aa17.71■□□□□ 0.43
HLA-C-210ENST00000640219 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.42
HLA-C-210ENST00000640219 MMP14P50281 582 aa17.7■□□□□ 0.42
HLA-C-210ENST00000640219 CAP1Q01518 475 aa17.7■□□□□ 0.42
HLA-C-210ENST00000640219 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
HLA-C-210ENST00000640219 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
HLA-C-210ENST00000640219 PPP1R12BO60237 982 aaPredicted RBP17.69■□□□□ 0.42
HLA-C-210ENST00000640219 MAP3K11Q16584 847 aa17.69■□□□□ 0.42
HLA-C-210ENST00000640219 STRIP1Q5VSL9 837 aa17.69■□□□□ 0.42
HLA-C-210ENST00000640219 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
HLA-C-210ENST00000640219 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
HLA-C-210ENST00000640219 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
HLA-C-210ENST00000640219 CEP290O15078 2479 aa17.69■□□□□ 0.42
HLA-C-210ENST00000640219 WTIPA6NIX2 430 aaPredicted RBP17.68■□□□□ 0.42
HLA-C-210ENST00000640219 ARHGEF6Q15052 776 aa17.68■□□□□ 0.42
HLA-C-210ENST00000640219 DEFB129Q9H1M3 183 aa17.68■□□□□ 0.42
HLA-C-210ENST00000640219 PTCH2Q9Y6C5 1203 aa17.68■□□□□ 0.42
HLA-C-210ENST00000640219 MED23Q9ULK4 1368 aa17.67■□□□□ 0.42
HLA-C-210ENST00000640219 MYCP01106 439 aaPredicted RBP17.67■□□□□ 0.42
HLA-C-210ENST00000640219 HDGFL1Q5TGJ6 251 aa17.67■□□□□ 0.42
HLA-C-210ENST00000640219 DBF4Q9UBU7 674 aaPredicted RBP17.67■□□□□ 0.42
HLA-C-210ENST00000640219 UNCXA6NJT0 531 aa17.66■□□□□ 0.42
HLA-C-210ENST00000640219 PDE8AO60658 829 aa17.66■□□□□ 0.42
HLA-C-210ENST00000640219 LMOD3Q0VAK6 560 aa17.66■□□□□ 0.42
HLA-C-210ENST00000640219 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
HLA-C-210ENST00000640219 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
HLA-C-210ENST00000640219 PTPN18Q99952 460 aa17.66■□□□□ 0.42
HLA-C-210ENST00000640219 COL1A1P02452 1464 aaPredicted RBP17.66■□□□□ 0.42
HLA-C-210ENST00000640219 GJA5P36382 358 aa17.65■□□□□ 0.42
HLA-C-210ENST00000640219 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
HLA-C-210ENST00000640219 DPF3Q92784 378 aa17.65■□□□□ 0.42
HLA-C-210ENST00000640219 COA1Q9GZY4 146 aa17.65■□□□□ 0.42
HLA-C-210ENST00000640219 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
HLA-C-210ENST00000640219 LAMB1P07942 1786 aa17.64■□□□□ 0.41
HLA-C-210ENST00000640219 TESPA1A2RU30 521 aaPredicted RBP17.64■□□□□ 0.41
HLA-C-210ENST00000640219 RIC3Q7Z5B4 369 aa17.64■□□□□ 0.41
HLA-C-210ENST00000640219 HYPKQ9NX55 129 aa17.64■□□□□ 0.41
HLA-C-210ENST00000640219 SSC5DA1L4H1 1573 aa17.64■□□□□ 0.41
HLA-C-210ENST00000640219 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
HLA-C-210ENST00000640219 IREB2P48200 963 aaKnown RBP17.63■□□□□ 0.41
HLA-C-210ENST00000640219 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
HLA-C-210ENST00000640219 SUPT20HL1Q3ZLR7 823 aa17.63■□□□□ 0.41
HLA-C-210ENST00000640219 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
HLA-C-210ENST00000640219 MINPP1Q9UNW1 487 aa17.63■□□□□ 0.41
HLA-C-210ENST00000640219 PPP2R3BQ9Y5P8 575 aa17.63■□□□□ 0.41
HLA-C-210ENST00000640219 ZNF646O15015 1829 aaPredicted RBP17.63■□□□□ 0.41
HLA-C-210ENST00000640219 CHL1O00533 1208 aa17.62■□□□□ 0.41
HLA-C-210ENST00000640219 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
HLA-C-210ENST00000640219 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms