RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 TRAK2O60296 914 aa11.93□□□□□ -0.5
ATM-226ENST00000638443 IFIT1P09914 478 aaKnown RBP11.93□□□□□ -0.5
ATM-226ENST00000638443 AK7Q96M32 723 aa11.93□□□□□ -0.5
ATM-226ENST00000638443 PAG1Q9NWQ8 432 aa11.93□□□□□ -0.5
ATM-226ENST00000638443 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
ATM-226ENST00000638443 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 WTIPA6NIX2 430 aaPredicted RBP11.92□□□□□ -0.5
ATM-226ENST00000638443 ZPR1O75312 459 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 CPA1P15085 419 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
ATM-226ENST00000638443 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 RETREG2Q8NC44 543 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 SNX14Q9Y5W7 946 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 TAF6LQ9Y6J9 622 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 PDE8BO95263 885 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 MCCP23508 829 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 NEK4P51957 841 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 CCDC152Q4G0S7 254 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
ATM-226ENST00000638443 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
ATM-226ENST00000638443 TNRC6CQ9HCJ0 1690 aaKnown RBP11.92□□□□□ -0.5
ATM-226ENST00000638443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
ATM-226ENST00000638443 CLSTN1O94985 981 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 NFKBIBQ15653 356 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 KIAA1211Q6ZU35 1233 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 RUFY2Q8WXA3 655 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 AKAP2Q9Y2D5 859 aa11.91□□□□□ -0.5
ATM-226ENST00000638443 FRAT2O75474 233 aaPredicted RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 RFC4P35249 363 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 MCAMP43121 646 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 ZAP70P43403 619 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 PHKA1P46020 1223 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 ADCK5Q3MIX3 580 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 MPHOSPH8Q99549 860 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 RBM8AQ9Y5S9 174 aaKnown RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 CELF1Q92879 486 aaKnown RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 SETDB2Q96T68 719 aa11.9□□□□□ -0.5
ATM-226ENST00000638443 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
ATM-226ENST00000638443 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
ATM-226ENST00000638443 DDIT3P35638 169 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 HIP1O00291 1037 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 ST18O60284 1047 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 FGFR2P21802 821 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 ANAPC15P60006 121 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 CHRNDQ07001 517 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 NFIXQ14938 502 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 VPS53Q5VIR6 699 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
ATM-226ENST00000638443 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
ATM-226ENST00000638443 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
ATM-226ENST00000638443 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 ARAP2Q8WZ64 1704 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 GOLGB1Q14789 3259 aaKnown RBP11.88□□□□□ -0.51
ATM-226ENST00000638443 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
ATM-226ENST00000638443 NECTIN1Q15223 517 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 PUM3Q15397 648 aaKnown RBP11.88□□□□□ -0.51
ATM-226ENST00000638443 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 CCDC102BQ68D86 513 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 MAST3O60307 1309 aa11.88□□□□□ -0.51
ATM-226ENST00000638443 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 M0R2C6 588 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 DTNBO60941 627 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 KCNJ4P48050 445 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 CREB3L3Q68CJ9 461 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
ATM-226ENST00000638443 RFX7Q2KHR2 1363 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 AKAP11Q9UKA4 1901 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 A0A1B0GUL6 1792 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 SLC27A2O14975 620 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 CASTP20810 708 aaKnown RBP11.87□□□□□ -0.51
ATM-226ENST00000638443 ZNF827Q17R98 1081 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
ATM-226ENST00000638443 NPHP1O15259 732 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 EPB41L2O43491 1005 aaKnown RBP11.86□□□□□ -0.51
ATM-226ENST00000638443 KDM4AO75164 1064 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 CYP2E1P05181 493 aaPredicted RBP11.86□□□□□ -0.51
ATM-226ENST00000638443 GYS1P13807 737 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
ATM-226ENST00000638443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
ATM-226ENST00000638443 LPIN2Q92539 896 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
ATM-226ENST00000638443 PRDM16Q9HAZ2 1276 aa11.86□□□□□ -0.51
ATM-226ENST00000638443 PIH1D3Q9NQM4 214 aaKnown RBP11.86□□□□□ -0.51
ATM-226ENST00000638443 IQSEC3Q9UPP2 1182 aaPredicted RBP11.86□□□□□ -0.51
ATM-226ENST00000638443 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms